Gene Rpic12D_3276 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3276 
Symbol 
ID8020960 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3460263 
End bp3461108 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content70% 
IMG OID644832071 
Producttranscriptional regulator, XRE family 
Protein accessionYP_002983214 
Protein GI241664854 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGATT TCACCGCCGA CCTTGCGCCC TTGCCCGCCG CGCCCCGCAA CGAGCTGGGC 
GAGTTCCTGC GCAGCCGCCG CAGCCATCTG CGTCCGCAGG ACGTGGGGCT GCCCGAGGGC
AGCGGGCGCC GCCGCACCGC CGGCCTGCGC CGGGAAGAAG TCGCGCAGCT CGCCAACATC
AGCATCGATT GGTACGTGCG CATCGAGCAG GGGCGCGACG TGCGGCCTTC CGTGGCGACC
ATCGAGGCGA TCGGGCGGGC GCTGAAGCTG TCTTCGGACG AGCGCGCGCA CATGCGGGGC
CTGGCGCGTG CCGAATCCGT TTTGACGGGC GCCGGCGCGG GAGCGGCCGG GCGTTCCACG
GCCGAGGCGG TGCCGGATGT CTTGCGGCGC GCCGTCGCCG GCATGGTGCT GCCCGCCCAC
GTGCGCAGCT ATCGCACCGA ACTGCTGTGC TGGAACGAGG CGACCTCGCA GCTCTTCATG
GATTTCGGCA CGATGCCGCC GGAAGACCGC AACTCGCTGG TCTACATGTT CCTGTACGCC
AATGCGCGCG AGCGTTTTGT CGAGTGGGAA AACGAGGCGC GCAGGATGCT GGCGAAGTTT
CGCGCGGTGT ACGACCCGCA TGCAGATGAC CCGGTGCTCG TGGCGCTGGT CGACCGGCTG
CGCACCTGCA GCCGCGAGTT CGATACCTGG TGGCGCCAGC ACGAAGTGCG CGCCCAGCGT
GCAGAACATA AGCTGATCCG CACGCCCGGC GGCCAGGTCG TCCGCTACGA CTACATCGGC
CTGCCGGTAA TGGAAGACCC GCGCCTGCGC ATGGTGCTGT ACGTGCCCGT CGAGGACGGG
GCCTGA
 
Protein sequence
MDDFTADLAP LPAAPRNELG EFLRSRRSHL RPQDVGLPEG SGRRRTAGLR REEVAQLANI 
SIDWYVRIEQ GRDVRPSVAT IEAIGRALKL SSDERAHMRG LARAESVLTG AGAGAAGRST
AEAVPDVLRR AVAGMVLPAH VRSYRTELLC WNEATSQLFM DFGTMPPEDR NSLVYMFLYA
NARERFVEWE NEARRMLAKF RAVYDPHADD PVLVALVDRL RTCSREFDTW WRQHEVRAQR
AEHKLIRTPG GQVVRYDYIG LPVMEDPRLR MVLYVPVEDG A