| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3251 |
|---|
| Symbol | |
|---|
| ID | 8020935 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | + |
|---|
| Start bp | 3433929 |
|---|
| End bp | 3435101 |
|---|
| Gene Length | 1173 bp |
|---|
| Protein Length | 390 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644832046 |
|---|
| Product | chromate transporter, chromate ion transporter (CHR) family |
|---|
| Protein accession | YP_002983189 |
|---|
| Protein GI | 241664829 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2059] Chromate transport protein ChrA |
|---|
| TIGRFAM ID | [TIGR00937] chromate transporter, chromate ion transporter (CHR) family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCTTG CTCCCGAACG CCCCACCTAC ACGCTGCGGC AACTGCTGCT GTATTTCCTC
CGGCTTGGCG CACTGGGCTT CGGCGGCCCG GTCGCGCTGG CCGGCTACAT GCGCCGCGAT
CTGGTCGATA CCCGCCAGTG GATTACCGAA GCGGACTACA AGGAAGGCCT TGCGCTGGCC
CAGCTCGCAC CGGGGCCGCT GGCCGCGCAA CTGGCCATCT ACCTTGGCTA CGTGCACTAC
CGCATCGTCG GCGCCACGCT GGTCGGCCTT GCGTTCGTGC TGCCTTCGTT CCTGATGGTG
GTGGCGCTGG GCTGGGCTTA TGTGCGCTTT GGCGGGCTGA CCTGGATGCA ATCGGTGTTC
TATGGCGTGG GTGCCGCAGT GATCGGCATC ATCGCCATCA GCGCGCACAA GCTCACCACC
AAGAGCGTCG GCAAGGACAA GCTGCTGTGG GCCGTCTATC TCTTGCTGGC GGCGGTGACG
GTCGTGACGG AATCCGAAGT GGCCTGGCTG TTTGTGGCTG CGGGTGTGCT GGTGTGGTTC
TGGCGCGCAC CGCCCCGGTG GCTGCGCCAG GGCCGCATGA ACGCCGTAGC CGTTGCCCCG
GTCGCAGCGG CCAGCAGCCT GCTCGGCACG ATGGATTCTT CGCTGCTCTC GCAGCTTGGC
GCGTTCTTCG CCAAGGCTGG TGCGTTCGTG TTCGGTTCGG GGCTGGCCAT CGTGCCGTTC
CTCTACGGCG GCGTGGTCAC GGAACACCAC TGGCTCAACG AAAAGCAGTT CGTCGACGCG
GTGGCCGTGG CGATGATCAC GCCCGGCCCG GTGGTCATCA CTGTCGGCTT TATCGGCTAC
CTGGTGGCGG GCCTGCCCGG TGCGTGCGTG GCCGCGCTCG GTACGTTCCT GCCGTGCTAC
CTCTTCACCA TCCTGCCGGC ACCGTACTTC AAGAAATACG GCAAGCTGCC CTCCATCCTC
GCGTTTGTGG ATGGCGTGAC GGCGGCAGCG GTGGGCGCTA TTACCGGCGC GGTGATCGTC
CTGGCCAAGC GCTCCATCGT CGATGTACCG ACGGCGCTGC TGGCCGTGGC GACGGTGCTG
CTGCTCGTGA AGTTCAAGAA GCTGCCCGAA CCGGTGATCG TGGCGGGCGC CGCATTGCTT
GGCCTGGCGC TGTATCCGCT GCTGCATCGC TGA
|
|---|
| Protein sequence | MNLAPERPTY TLRQLLLYFL RLGALGFGGP VALAGYMRRD LVDTRQWITE ADYKEGLALA
QLAPGPLAAQ LAIYLGYVHY RIVGATLVGL AFVLPSFLMV VALGWAYVRF GGLTWMQSVF
YGVGAAVIGI IAISAHKLTT KSVGKDKLLW AVYLLLAAVT VVTESEVAWL FVAAGVLVWF
WRAPPRWLRQ GRMNAVAVAP VAAASSLLGT MDSSLLSQLG AFFAKAGAFV FGSGLAIVPF
LYGGVVTEHH WLNEKQFVDA VAVAMITPGP VVITVGFIGY LVAGLPGACV AALGTFLPCY
LFTILPAPYF KKYGKLPSIL AFVDGVTAAA VGAITGAVIV LAKRSIVDVP TALLAVATVL
LLVKFKKLPE PVIVAGAALL GLALYPLLHR
|
|---|
| |