Gene Rpic12D_3193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3193 
Symbol 
ID8020877 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3376902 
End bp3377783 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content61% 
IMG OID644831989 
ProductF0F1 ATP synthase subunit A 
Protein accessionYP_002983132 
Protein GI241664772 
COG category[C] Energy production and conversion 
COG ID[COG0356] F0F1-type ATP synthase, subunit a 
TIGRFAM ID[TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.586213 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACTG AAGTCGCAGA AGCCGCCGGC CACGCCGCCG AGCACGCTCT CACGCCTTCC 
GCGTATATCG CGGAGCATTT GCAGAATTTC AACAGCATCG GTGGCAAGCA GGCCTCCGTC
GTCGACTTCT CCGTCATCAA CTGGGACACG ATGTTCTGGT CCGTATTGAT GGGCCTGATC
GGCATCATCG TCCTGGGCAT TGCCGCACGC CGCGTCACCG CCGGCGTCCC GGGCCGCTTC
CAGGCTTTCG TTGAACTCGT CGTCGAGATG GTCGATGACC AGGCCAAAGG CATCATCCAC
GGCGATCGTT CCTGGATTGC TCCGCTGGCG CTGATGGTGT TCGTGTGGGT CACGCTGATG
AACGCGGTCG ACCTGGTCCC GGTGGACTGG GTCACGGGCG TCAACCACCT GCTCGGTACC
TTCGGCGTGC ACGTCCCGCA CCACCGCGCG GTGGCCACGG CTGACCTGAA CGGTACGTTC
GGCATGTCGT TCGCTGTGCT GATCCTGATG ATCTACTACA GCTTCAAGAT CAAGGGCGCC
GGCGGCTTTG CACACGAGCT GCTGTCGGCA CCGTTCGGCG CAAAGTGGTA CCTCGCGCCA
TTCAACCTGA TCCTCAACAT CATTGAATTC CTCGCCAAGG CTGTGTCGCT GGGCATGCGG
TTGTTCGGCA ACATGTACGC GGGCGAACTG GTGTTCCTGC TGATCGCGCT GCTTGGCTCG
GTCTGGACGT TCGGTGCTGA CACGTCGGCA CTGGGTTTCG TGGGTCACGT GGTGGCTGGC
GCAGTGTGGG CGATCTTCCA CATCCTGATC GTGCTGCTGC AAGCCTTCAT CTTCATGATG
CTGACGCTGG TGTACATCGG CCAGGCACAT GAACACCACT AA
 
Protein sequence
MATEVAEAAG HAAEHALTPS AYIAEHLQNF NSIGGKQASV VDFSVINWDT MFWSVLMGLI 
GIIVLGIAAR RVTAGVPGRF QAFVELVVEM VDDQAKGIIH GDRSWIAPLA LMVFVWVTLM
NAVDLVPVDW VTGVNHLLGT FGVHVPHHRA VATADLNGTF GMSFAVLILM IYYSFKIKGA
GGFAHELLSA PFGAKWYLAP FNLILNIIEF LAKAVSLGMR LFGNMYAGEL VFLLIALLGS
VWTFGADTSA LGFVGHVVAG AVWAIFHILI VLLQAFIFMM LTLVYIGQAH EHH