Gene Rpic12D_3188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3188 
Symbol 
ID8020872 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3372857 
End bp3373732 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content61% 
IMG OID644831984 
ProductF0F1 ATP synthase subunit gamma 
Protein accessionYP_002983127 
Protein GI241664767 
COG category[C] Energy production and conversion 
COG ID[COG0224] F0F1-type ATP synthase, gamma subunit 
TIGRFAM ID[TIGR01146] ATP synthase, F1 gamma subunit 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.49841 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGGAA CAAAAGAAAT CCGCACCAAG ATCAAGAGCG TGCAGAACAC GCGCAAGATC 
ACCAAGGCGA TGGAAATGGT CGCCGCATCC AAGATGCGCA AGGCGCAGGA ACGGATGCGT
GCTGCTCGCC CGTACGCCGA GAAGATCCGC AACGTGGCCG CGCACATGGC ACTGGCCAAT
CCGGAGTACA AGCACCCGTT CATGGTGGCG CGCGACATTA AGCGTGCCGG CCTGATCGTG
GTGACGACGG ACAAAGGCCT GTGCGGTGGC TTGAACACCA ACGTGCTGCG TGCCGTCACC
ACCCAACTGC GCGATCTGCA GAACAAGGGC GTTGAGACGC AAACCACCGC CATCGGTACC
AAGGGTATGC AGTTCCTTGG CCGCGTCGGT GCCAAGGTCG TCTCGAATGT CGTGCATCTG
GGCGACACGC CGCATCTGGA AAAGCTGATC GGTGCAATCA AGGTGCAGCT GGACGCGTTC
AACGCAGGTC AGATCGATGC CGTGTACCTG GCGTACACCC GCTTCATCAA CACGATGAAG
CAGGAGCCGG TGGTCGAGCA GCTGCTGCCG CTGACCGCCG ACAAGCTCGC GCAGAGCGAC
GCCGAGAAGC AGGCCTACTC GTGGGATTAC ATCTACGAGC CGGACGCGCA AACGGTGGTC
GACGAGCTGC TGATCCGCTA CGTCGAGGCG CTGGTGTACC AGGCGGTGGC CGAGAACATG
GCGTCCGAGC AATCGGCCCG GATGGTGGCG ATGAAGGCGG CTTCGGACAA CGCGAAGAAC
GTGATCGGCG AACTGCAACT GGTCTACAAC AAGACCCGTC AGGCAGCGAT CACGAAGGAA
CTGTCCGAGA TCGTCAGCGG CGCAGCTGCA GTCTGA
 
Protein sequence
MAGTKEIRTK IKSVQNTRKI TKAMEMVAAS KMRKAQERMR AARPYAEKIR NVAAHMALAN 
PEYKHPFMVA RDIKRAGLIV VTTDKGLCGG LNTNVLRAVT TQLRDLQNKG VETQTTAIGT
KGMQFLGRVG AKVVSNVVHL GDTPHLEKLI GAIKVQLDAF NAGQIDAVYL AYTRFINTMK
QEPVVEQLLP LTADKLAQSD AEKQAYSWDY IYEPDAQTVV DELLIRYVEA LVYQAVAENM
ASEQSARMVA MKAASDNAKN VIGELQLVYN KTRQAAITKE LSEIVSGAAA V