| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3171 |
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| Symbol | putA |
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| ID | 8020855 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 3347696 |
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| End bp | 3351676 |
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| Gene Length | 3981 bp |
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| Protein Length | 1326 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644831967 |
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| Product | trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase |
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| Protein accession | YP_002983110 |
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| Protein GI | 241664750 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4230] Delta 1-pyrroline-5-carboxylate dehydrogenase |
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| TIGRFAM ID | [TIGR01238] delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTACAA CCACCCTCGG GGTCAAGCTG GACGATGCTT CGCGTGAACG CCTCAAGCGC
GTTGCGCAGT CCATTGACCG CACGCCGCAT TGGCTGATCA AGCAGGCGAT CTTCACGTAT
CTGGATCAAG TGGAGCGGGG GCAGCTGCCA ACTGACGCAA ACGGCACGGC GGCGGATGGC
CTCCCGTCCG CCGCCGCAGC CGTCTCGGAC GTGCACGAGG GTGACGAGCC CGCGGTGCAA
CCGTTCCTCG AATTTGCGCA AAGCGTGCAA CCGCAGTCGG TCCTGCGCGC TGCCATCACC
GCCGCCTACC GTCGGCCGGA AACCGAAGCC ATTCCGATGC TGCTGGAGCA GGCCCGCCTG
CCGGGCGCGC TCGCCTCGGA AGCCAAGCAA CTCGCACGAG ACCTCGCCGG CAAGCTCCGC
ACGCAAAAGG TCGGCACCGG CCGCGAAGGT CTGGTGCAGG GTCTCATCCA GGAATTTTCG
CTGTCGAGCC AAGAAGGCGT GGCGCTGATG TGCCTGGCCG AGGCGCTGCT GCGCATTCCC
GACAAGGCCA CGCGCGACGC GCTCATCCGC GACAAGATCA GCAACGGCAA CTGGCATTCG
CACCTGGGCC AGAGCCCGTC GCTGTTCGTG AACGCCGCCA CCTGGGGCCT GCTGCTGACG
GGCAAGCTGG TCGCCACGCA TAACGAAGCC GGGCTGTCGA AGGCGCTCAC GCGCATCATC
GGCAAGAGCG GCGAGCCGCT GATCCGCAAG GGTGTGGATA TGGCGATGCG CCTGATGGGC
GAGCAGTTCG TCACCGGCGA AACCATCTCT GAAGCACTGG CCAACGCGCG CAAGTTCGAG
GCCGAGGGCT TCCGCTATTC CTACGACATG CTCGGCGAGG CCGCGATGAC GGAGGAAGAC
GCCCAGCGCT ACCTCGCGTC GTACGAGCAG GCGATCCGCG CGATCGGGCA GGCCTCGGGC
GGGCGCGGCA TCTACGAAGG GCCGGGCATC TCGATCAAGC TGTCGGCGCT GCACCCGCGC
TACAGCCGCG CGCAATACGA CCGCACCATC AACGAGCTGT ATCCGCGCGT GAAGGCGCTG
GCGATGCTGG CCCGCGAATA CGACATCGGC ATCAATATCG ACGCTGAAGA GGCCGACCGC
CTGGAGCTGT CGCTCGACCT GCTGGAGCGC CTGTGCTTTG CGCCCGAGCT GGCTGGCTGG
AATGGCATCG GCTTCGTGGT GCAGGGCTAC CAGAAGCGCT GCCCGTTCGT GCTCGACTAC
ATCATCGACC TGGCCCGTCG CAGCAAGCAT CGCCTGATGA TCCGCCTGGT GAAGGGCGCG
TATTGGGACA GCGAGATCAA GCGCGCCCAG GTCGACGGCC TGGAGGGCTA CCCCGTCTAC
ACGCGCAAGG TCTACACCGA CGTGTCGTAT CTGGCCTGCG CGCGCAAGCT GCTGGCCGCG
CCGGAAGCGA TCTTCCCGCA GTTCGCCACG CACAATGCGC ACACGCTCGC GGCCATTTAC
CACATGGCCG GCCAGAACTA CTATCCCGGC CAATATGAAT TCCAGTGCCT GCACGGCATG
GGCGAGCCGC TGTACGAGCA GGTCGTCGGA AACAAGCCGG GCAAGCTGAA CCGCCCGTGC
CGCATCTACG CGCCGGTCGG TACGCACGAA ACGCTGCTGG CCTACCTCGT GCGCCGTCTG
CTGGAAAACG GCGCCAACAC CTCGTTCGTG AACCGCATCG CGGACGAGTC GATTCCTCTG
GACGACCTCG TCGCCGACCC GGTGGCGGTG GTGGAAAAGA TGCACGCCGA TGAAGGGACG
CTCGGCCTGC CGCATCCGAA GATTCCGCTG CCGCGCGCCC TTTACGGTGA CGTTCGCGCC
AACTCGTCGG GCATCGACCT GGCGAACGAG CAGCGCCTGG CGTCGTTGTC GTCCGCCCTT
CTTGCCGGCA CCAGCACCGT CTGGTCGGCC GAGCCGACCA TCGGCGATGC GCCTTACGTG
GGGGGGCCAT CGCAACTTCG GCAGCCGGTG CGCAATCCGT CGGACCTGCG TGACGTGGTC
GGCCACGTGA CCGAAGCCAC CGAAGCCGAT GTGGATGCCG CGTTGTCGGC CGCCACCGCT
GCCGCCCCGA TCTGGCAAGC CACGCCGCCC GAGGCACGGG CCGCACTGCT CGATCGCGCA
GCAGACCTCA TGGAAGGCGA GATGCAGCAC CTGATGGGGC TGATCATTCG CGAGGCGGGC
AAGACGCTGT CCAATGCGAT TGCCGAAGTG CGCGAAGCCG TCGATTTCCT GCGCTATTAC
GCAGCGCAGG TGCGCGGCGG GTTCTCGAAT GACACGCATC GCCCGCTGGG CCCGGTGGTC
TGTATCAGCC CGTGGAACTT CCCGCTGGCA ATCTTCACCG GCCAGGTGAG CGCTGCGCTG
GCTGCAGGCA ACCCGGTCCT CGCCAAGCCC GCTGAGCAGA CCCCGCTGAT CGCCGCCCAG
GCTGTGCGCA TCCTGCGCGA AGCCGGCGTG CCGGCCGGTG CCGTGCAACT GCTGCCGGGC
CGCGGCGAGA CCGTCGGCGC AGCGCTGGTG AAGGACGTGC GCACCAAGGG CGTGATGTTC
ACCGGCTCCA CCGAAGTCGC GCGCATCCTG CAGCGCACGC TGGCCGGCCG CCTCGATGCC
AACGGCGCGC CGATCCCGCT GATTGCCGAG ACCGGTGGCC AGAACGCGAT GATCGTCGAT
TCGTCCGCGC TGGCCGAGCA GGTGGTGGCC GATGTGCTGT CGTCCGCGTT TGATTCGGCG
GGCCAGCGTT GCTCGGCGCT GCGTGTGCTG TGCCTGCAGG ACGACGTTGC TGACCGCGTG
CTCGCGATGC TCAAGGGCGG CATGGCCGAA CTGGCGATGG GCAATCCGGA TCGCCTGTCG
GTGGATGTCG GCCCCGTGAT CGACGCTGAA GCGCGCGACA ACATCGTCGG CCACATCGAA
GCGATGCGTG CCAAGGGCCG CCGCGTGCAC CAGGCACCGG TGCCGGCTGC GTGCGCGCAC
GGTACCTTCG TGCCGCCGAC GGTGATCGAA CTCGACAGCC TGTCGGACCT GACGCGTGAG
ATCTTCGGTC CCGTGCTGCA CGTGGTGCGC TGGAAGCGTT CGGCGGACAA CACCGGTTTG
ACGAAGCTGA TCGAGCAGAT CAACGGTACG GGCTACGGGC TGACGCTGGG CATCCACACG
CGTATCGACG AGACCATCGC GCACGTGGTG GACCGCGCGC ACGTGGGCAA CCTGTATGTG
AACCGCAATA TCGTCGGCGC CGTGGTGGGC GTGCAGCCGT TCGGTGGCGA GGGCCTGTCG
GGTACGGGCC CGAAGGCCGG CGGCCCGCTG TATCTGCTGC GCCTGCTGTC GACGTGCCCG
CAGGACGCCA TGCGCACCGC GCTGCAACTG ACCGCAGGCG CGGGTACGGA GGTCGATACC
GATGCGCGCC GCGCGCTGCT GGCGCCGTTC GATGCGCTGA CGGAATGGGC TCGCAAGCAA
TCGCCGGAAC TGGCCTCGCT GTGCGAGCGC CTGGCTGCAG CCTCGGCCAC GGGCGCCACC
GCCACGCTGC CCGGCCCGAC CGGCGAGCGC AACACCTACA CGCTGTTGCC GCGCGAAGCC
GTGCTGTGCG TGGCGGCCGA TCCGGCGGAT TGGCTGCGCC AGCTCGCCGC CATCCTGGCT
GTCGGCAGCC TGGCCGTTGT GCAGGAAAAC CCTGCCATCG AAGCAGTACT TCGGGGCTTG
CCGGCGGCAG TACAATCGCG CGTCCGCGTG GTCGGCTCGA CCGACGAAGC GGCGTTTGAT
GCGGTGCTGC ATCACGGCGA TTCGGACCAT CTGCGCGCCA TCTGCGAAGG ACTGGCACGG
CGTGCCGGCC CGATCGTGGG GGTGCAAGGC CTGCCGCATG GCGGGGAAGG GCTGGCGCTG
GAGCGCCTGC TGATCGAGCG TTCGCTGTCG GTCAATACGG CCGCCGCGGG TGGCAACGCC
AGCCTGATGA CCATCGGCTG A
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| Protein sequence | MATTTLGVKL DDASRERLKR VAQSIDRTPH WLIKQAIFTY LDQVERGQLP TDANGTAADG
LPSAAAAVSD VHEGDEPAVQ PFLEFAQSVQ PQSVLRAAIT AAYRRPETEA IPMLLEQARL
PGALASEAKQ LARDLAGKLR TQKVGTGREG LVQGLIQEFS LSSQEGVALM CLAEALLRIP
DKATRDALIR DKISNGNWHS HLGQSPSLFV NAATWGLLLT GKLVATHNEA GLSKALTRII
GKSGEPLIRK GVDMAMRLMG EQFVTGETIS EALANARKFE AEGFRYSYDM LGEAAMTEED
AQRYLASYEQ AIRAIGQASG GRGIYEGPGI SIKLSALHPR YSRAQYDRTI NELYPRVKAL
AMLAREYDIG INIDAEEADR LELSLDLLER LCFAPELAGW NGIGFVVQGY QKRCPFVLDY
IIDLARRSKH RLMIRLVKGA YWDSEIKRAQ VDGLEGYPVY TRKVYTDVSY LACARKLLAA
PEAIFPQFAT HNAHTLAAIY HMAGQNYYPG QYEFQCLHGM GEPLYEQVVG NKPGKLNRPC
RIYAPVGTHE TLLAYLVRRL LENGANTSFV NRIADESIPL DDLVADPVAV VEKMHADEGT
LGLPHPKIPL PRALYGDVRA NSSGIDLANE QRLASLSSAL LAGTSTVWSA EPTIGDAPYV
GGPSQLRQPV RNPSDLRDVV GHVTEATEAD VDAALSAATA AAPIWQATPP EARAALLDRA
ADLMEGEMQH LMGLIIREAG KTLSNAIAEV REAVDFLRYY AAQVRGGFSN DTHRPLGPVV
CISPWNFPLA IFTGQVSAAL AAGNPVLAKP AEQTPLIAAQ AVRILREAGV PAGAVQLLPG
RGETVGAALV KDVRTKGVMF TGSTEVARIL QRTLAGRLDA NGAPIPLIAE TGGQNAMIVD
SSALAEQVVA DVLSSAFDSA GQRCSALRVL CLQDDVADRV LAMLKGGMAE LAMGNPDRLS
VDVGPVIDAE ARDNIVGHIE AMRAKGRRVH QAPVPAACAH GTFVPPTVIE LDSLSDLTRE
IFGPVLHVVR WKRSADNTGL TKLIEQINGT GYGLTLGIHT RIDETIAHVV DRAHVGNLYV
NRNIVGAVVG VQPFGGEGLS GTGPKAGGPL YLLRLLSTCP QDAMRTALQL TAGAGTEVDT
DARRALLAPF DALTEWARKQ SPELASLCER LAAASATGAT ATLPGPTGER NTYTLLPREA
VLCVAADPAD WLRQLAAILA VGSLAVVQEN PAIEAVLRGL PAAVQSRVRV VGSTDEAAFD
AVLHHGDSDH LRAICEGLAR RAGPIVGVQG LPHGGEGLAL ERLLIERSLS VNTAAAGGNA
SLMTIG
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