Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_3165 |
Symbol | |
ID | 8020849 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 3339587 |
End bp | 3340657 |
Gene Length | 1071 bp |
Protein Length | 356 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644831961 |
Product | Integrase catalytic region |
Protein accession | YP_002983104 |
Protein GI | 241664744 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2826] Transposase and inactivated derivatives, IS30 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGACAAA GCTACGAACA CCTGAGCGCC GAGGAGCGTG GTGCGATCTT CGCGATGAAG CTGGAGCAGC GAAGCACGCG GGAGATTGCG CGTGCACTGC AACGCTCAGC CAGCACGATC AGCCGGGAGC TTCGGCGCAA CGGCTGGAAA CCGGAACAAG AGCGTGGCCC AATGGGGCGG CCCACGATCG CCGGTGGCTA CAATGCGGTG CGCGCCGGTC AGCGGGCCTC CAGATTGCGA CGCAAGCCCC GTCGTGAGCG CAAGTTGTGC CGACAAGGCA AGCTGTGGCC TGAGGTGCGC CAATACCTGG AGAGACGCTT CTCGCCAGAG CAGGTGGCTG CACAGCTCAA ACGTGTCCAT CCCGGCGAAC CTGCTTTGAA CGTCTCCCAC GAAACGATCT ACCACGCTAT TTATGCCGCG CCACGCGGTG CGCTGCGGCG CGAGTTGGTC AGCCTGCTGC GACAGGCGCA CGGTGCCCGC AAGCCTCGCT CGCGCGGGCA GGACCGGCGC GGGCAACTCA ACGACATGGT GAGCATTCAT GTGCGCCCGC CTGAGGCCAA CGATCGGCTG ATCCCGGGGC ACTGGGAGGG TGACCTGATC AAAGGGGCTG GTAACCGCTC GGCAGTCGGT ACGCTCATCG ATCGCAGCAC CTTGTTCCTG ATGCTGGTGA AGATCGACGG CAGTACCGCC GAGGCCGCCT TGCAGGCCTA CAGCGCCGCG TTCGCGCCCT TGCCCGAGGA GTTGCGCAAG ACGCTGACGT ACGACCAGGG CAAGGAAATG GCGCTACATC GCAAGCTCGC CGAGGCGACA GGTATTCGGA TCTACTTCTG TGACCCGCAC AGCCCCTGGC AGCGCGGCAT CTGCGAAAAC ACCAATGGTC TGCTGCGCCA GTACTTGCCA AAGGGAGCAG ACCTCTCGGT GCTCTCACAG CGTCAGCTTG ACGCGATTGC GCTGTCGATG AACACCCGAC CGCGTAAAAC ACTCGGCTGG CGCACTCCCG CAGAAGCCTT CATTGAGAAC TGCGCCAAGC ACGGAATCGT CATTGACCCC GCTGTTGCAC TTGGGGCTTG A
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Protein sequence | MGQSYEHLSA EERGAIFAMK LEQRSTREIA RALQRSASTI SRELRRNGWK PEQERGPMGR PTIAGGYNAV RAGQRASRLR RKPRRERKLC RQGKLWPEVR QYLERRFSPE QVAAQLKRVH PGEPALNVSH ETIYHAIYAA PRGALRRELV SLLRQAHGAR KPRSRGQDRR GQLNDMVSIH VRPPEANDRL IPGHWEGDLI KGAGNRSAVG TLIDRSTLFL MLVKIDGSTA EAALQAYSAA FAPLPEELRK TLTYDQGKEM ALHRKLAEAT GIRIYFCDPH SPWQRGICEN TNGLLRQYLP KGADLSVLSQ RQLDAIALSM NTRPRKTLGW RTPAEAFIEN CAKHGIVIDP AVALGA
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