Gene Rpic12D_3147 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3147 
Symbol 
ID8020831 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3314701 
End bp3315441 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content66% 
IMG OID644831943 
Producttranscriptional regulator, GntR family 
Protein accessionYP_002983086 
Protein GI241664726 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGAAG CGGCTCGACT GCCGGACGGC GGTAAAATCG GCGCCATGAC CGAGACCACC 
GCCGCCGACA TCTCCTCCGA GGGCATTGCC GACGACATCG CCCAGGCGAT CGTCGCGCAT
CGGCTGCCGC CGGGCACCAA GCTGCGCGAA GAGGCGCTGG CGCGGGTCTA CCACGTCAGC
CGCACGAAGA TTCGCGCGGC GCTGCTGATG CTGGCCAAGG ACAAGCTGAT CCGCATGGAG
CCTGACCGCG GTGCATTCGT GGCAAAGCCG GACGAGACCG AGGCGCGCGA GGTCTTTGCC
GTGCGCCGCG TGCTGGAGGT CGCGCTGGTG CGCGAGTTCA TCGCCAAAGC GACGCCCGCC
GATTACAAGC GGCTGGAAAA GCACCTGGCC GAAGAGCACA AGGTGGCGGC CAGCGGCGAC
CTGTCGGACG TCCCGCGCCG CAATCGCCTG ATGGCCGACT TTCACCTGCT GATGGCCGAC
GTGGTCGGGA ACAGCGTGCT CAAGGAAATG CTGTACGAGC TTTCCGCCCG CAGCTCGGTG
ATCACGATGA TGTACCAGTC CACGTACGAT GCCGTGCGTT CGTCCGACGA GCACACCGCT
TTCCTGGAGG CGGCCAAGCG CGGTGATGTG GAAGGCGCCA TCGCCCTGAT GGAAGAGCAC
ATGGCGCACA CCGAGGCGTC ACTCAAGTTC GAATCGCCGG GCGGCCGAGC GACGGATCTC
GTAGCCGCCC TCCTCGCCTG A
 
Protein sequence
MPEAARLPDG GKIGAMTETT AADISSEGIA DDIAQAIVAH RLPPGTKLRE EALARVYHVS 
RTKIRAALLM LAKDKLIRME PDRGAFVAKP DETEAREVFA VRRVLEVALV REFIAKATPA
DYKRLEKHLA EEHKVAASGD LSDVPRRNRL MADFHLLMAD VVGNSVLKEM LYELSARSSV
ITMMYQSTYD AVRSSDEHTA FLEAAKRGDV EGAIALMEEH MAHTEASLKF ESPGGRATDL
VAALLA