Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_3147 |
Symbol | |
ID | 8020831 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 3314701 |
End bp | 3315441 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644831943 |
Product | transcriptional regulator, GntR family |
Protein accession | YP_002983086 |
Protein GI | 241664726 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCTGAAG CGGCTCGACT GCCGGACGGC GGTAAAATCG GCGCCATGAC CGAGACCACC GCCGCCGACA TCTCCTCCGA GGGCATTGCC GACGACATCG CCCAGGCGAT CGTCGCGCAT CGGCTGCCGC CGGGCACCAA GCTGCGCGAA GAGGCGCTGG CGCGGGTCTA CCACGTCAGC CGCACGAAGA TTCGCGCGGC GCTGCTGATG CTGGCCAAGG ACAAGCTGAT CCGCATGGAG CCTGACCGCG GTGCATTCGT GGCAAAGCCG GACGAGACCG AGGCGCGCGA GGTCTTTGCC GTGCGCCGCG TGCTGGAGGT CGCGCTGGTG CGCGAGTTCA TCGCCAAAGC GACGCCCGCC GATTACAAGC GGCTGGAAAA GCACCTGGCC GAAGAGCACA AGGTGGCGGC CAGCGGCGAC CTGTCGGACG TCCCGCGCCG CAATCGCCTG ATGGCCGACT TTCACCTGCT GATGGCCGAC GTGGTCGGGA ACAGCGTGCT CAAGGAAATG CTGTACGAGC TTTCCGCCCG CAGCTCGGTG ATCACGATGA TGTACCAGTC CACGTACGAT GCCGTGCGTT CGTCCGACGA GCACACCGCT TTCCTGGAGG CGGCCAAGCG CGGTGATGTG GAAGGCGCCA TCGCCCTGAT GGAAGAGCAC ATGGCGCACA CCGAGGCGTC ACTCAAGTTC GAATCGCCGG GCGGCCGAGC GACGGATCTC GTAGCCGCCC TCCTCGCCTG A
|
Protein sequence | MPEAARLPDG GKIGAMTETT AADISSEGIA DDIAQAIVAH RLPPGTKLRE EALARVYHVS RTKIRAALLM LAKDKLIRME PDRGAFVAKP DETEAREVFA VRRVLEVALV REFIAKATPA DYKRLEKHLA EEHKVAASGD LSDVPRRNRL MADFHLLMAD VVGNSVLKEM LYELSARSSV ITMMYQSTYD AVRSSDEHTA FLEAAKRGDV EGAIALMEEH MAHTEASLKF ESPGGRATDL VAALLA
|
| |