| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3054 |
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| Symbol | |
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| ID | 8020737 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 3223065 |
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| End bp | 3224276 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644831851 |
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| Product | general secretion pathway protein F |
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| Protein accession | YP_002982995 |
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| Protein GI | 241664635 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | [TIGR02120] general secretion pathway protein F |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGCCT TCCGTTACGA AGCCGCCGAC GCCGCCGGCA AGACCGACAA GGGCGTCATC
GAAGCCGACA GCGCCCGCCA GGCGCGCACG CTGCTGAGGG CACGCGGGCT GACACCGCTG
CTGGTCGACA CGCTGGGTGC GCAGGCCACC AAGCGCGGCG GGTCGAGCTT CGGCAAGCGG
CTCTCGGCGC AGGAAAACGC ACTCGTCACG CGCCAGCTCG CCAGTCTTCT GGTGGCGGGC
CTGCCGCTCG ATGAAGCGCT GGCCGCGCTG GCCGATCAGG CCGAACGCGC GTACGTCGGC
GAACTGCTCG CGGCCATCCG CGCCGAGGTG GTGGGCGGCA GCTCGCTGTC GGTCGCGCTG
GCACAGCATC CGAAGGATTT CCCGGATATC TACCGCGCCC TCGTTTCAGC GGGCGAACAC
TCCGGCAACC TCGGCCTCGT CCTTTCACGC CTGGCCGACT ACATCGAGAG CCGCAACGCG
CTCACATCGA AGATCAAGCT GGCCTTCACG TACCCCGCCA TCGTCACGGT GGTGGCGTTT
GCGATCGTGA TCTTCCTGCT GTCATACGTG GTGCCGCAGG TGGTGAGCGT GTTTGCCAAC
ACCAAGCAGA AGCTGCCGAC GCTCACGATC ATCATGCTGT GGCTGTCGGA CTTTGTGCGG
AACTGGGGCT GGCTGGCGGC GATCGTGCTG GTAGCGTTGG GCTTGCTGAT CCGCAATCTG
CTCAAGCAAC CGGCGTTGCG GCTGTCGTGG CACAAGTGGC TGCTGACTGC ACCGCTGTTC
GGCAAGCTCG TCCGCGGTTA CAACACCGCG CGGTTTGCCA GCACGCTGGC GATTCTGACC
AGTGCCGGCG TGCCGATCTT GCGTGGGTTG CAGGCTGCGG GGGAAACGCT GAACAACGTT
GCGCTCAAGA CCAACGTCGA GGATGCATCC ACGCGCGTGC GCGAAGGGAC TTCGCTGGCG
CGGGCGTTGG CAGCGCAGAA TCAGTTTCCG CCTGTGCTGG TGCATCTGAT CCGCTCGGGT
GAGGCGACGG GGAATCTGCC TGCGATGTTG GAGCGGGCTG CGCAGGGCGA GGCGCAGGAG
CTTGAGCGCC GGACGTTGTT TCTCACGGGC TTGCTGGAGC CGGCGCTGAT TTTGACGATG
GGTGTGGTGG TGTTGTTGAT TGTGCTGGCG GTGTTGATGC CGATTATTGA GATTAATCAG
TTGGTGCACT GA
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| Protein sequence | MPAFRYEAAD AAGKTDKGVI EADSARQART LLRARGLTPL LVDTLGAQAT KRGGSSFGKR
LSAQENALVT RQLASLLVAG LPLDEALAAL ADQAERAYVG ELLAAIRAEV VGGSSLSVAL
AQHPKDFPDI YRALVSAGEH SGNLGLVLSR LADYIESRNA LTSKIKLAFT YPAIVTVVAF
AIVIFLLSYV VPQVVSVFAN TKQKLPTLTI IMLWLSDFVR NWGWLAAIVL VALGLLIRNL
LKQPALRLSW HKWLLTAPLF GKLVRGYNTA RFASTLAILT SAGVPILRGL QAAGETLNNV
ALKTNVEDAS TRVREGTSLA RALAAQNQFP PVLVHLIRSG EATGNLPAML ERAAQGEAQE
LERRTLFLTG LLEPALILTM GVVVLLIVLA VLMPIIEINQ LVH
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