| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3053 |
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| Symbol | |
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| ID | 8020736 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 3221486 |
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| End bp | 3223042 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644831850 |
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| Product | general secretory pathway protein E |
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| Protein accession | YP_002982994 |
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| Protein GI | 241664634 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | [TIGR02533] general secretory pathway protein E |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCACGC ACGCTTCCAC CACCGACGTC AGCACGCTCG AGCCGCCCTC GCAGTCGGCC
GTGCGGCTCG TGCCGTATGC GTTTGCGCGC GACGCCAGGT TGCTCGTCGC CCGCCAGGAC
GTCGACACGC TGGAGGTGTG GGTCTGCCCT GAAACCTCGC GCACGGCGCT GGCTGAACTC
GGCCGCGTGT TTGGCGCGCT GCATCTGGTG ACGCTCGACA CGGCGGCGCT GTCCACCGCC
ACGCAGACGG CCTACAACGC GCAAGACGGC AGTGCGGCCC AGGTGGTGGG CGAAGTGGAA
GGCGAAGTCG ACCTGTCGCG CCTGATGCAG GACATCCCTG CCGTGGAAGA CCTGCTCGAA
TCCGAAGACG ACGCGCCGAT CATCCGCATG ATCAACGCCC TGCTCACGCA GGCCGCGCGC
GAAGGCGCCT CGGACATCCA TATCGAGCCG TTCGAGAATG CATCCGTCGT GCGCTTTCGT
GTCGACGGCA CGCTGCGCGA CGTCGTGCGC CCGAAGAAAG CGCTGCACGG CGCGCTGATT
TCGCGCATCA AGATCATGGC GCAGCTCGAC ATTGCCGAGA AACGCCTGCC GCAGGACGGG
CGCATCACGC TGCGCGTGGG CGGTCGCCCG GTGGACGTGC GTGTGAGCAC CCTGCCCACC
GGCCACGGCG AACGCGCCGT GCTGCGTCTG CTCGACAAGG AAGCCGGCCG GCTCGACCTG
GGCAAGCTCG GCATGGGCGC CGGCACGCTG GCGCGCTTCG ATCACCTGAT CAACCAGCCG
CACGGCATCG TGCTCGTCAC CGGCCCGACG GGTTCGGGCA AGACGACCAC GCTGTATGCA
GCGCTGTCGC GGCTCGACGC GGCGTCCACC AACATCATGA CGGTGGAAGA CCCGATCGAA
TACGACCTCG ACGGCATCGG CCAGACGCAG GTCAATCCGA AGATCGACAT GACGTTCGCC
AAGGCCCTGC GCGCCATCCT GCGCCAGGAC CCGGACGTGG TGATGATCGG GGAAATCCGC
GACCTGGAAA CCGCGCAGAT TGCGGTGCAG GCCTCGCTGA CGGGCCACCT GGTGCTGGCG
ACGCTGCACA CGAATGATTC CGCCTCCGCC GTGACGCGCC TGATCGACAT GGGGATCGAA
CCGTTCCTGC TGTCTTCATC GCTGCTCGGT GTGCTGGCGC AGCGGCTGGT ACGCCGCCTG
TGCGTGCATT GCCGCCGCGA AGAAGTGCTC GAACTCACGC CTGCAGAAGT GGAAGCCGTG
GCCGGCACGC CGATCGCAGA CGGCGTGGCA CCGGCGGCAC CGGCACGCAA ATCGGTCTGG
CATCACGTCG GCTGCGAGCG TTGCAGCAAC TCCGGCTACC AGGGCCGGAC CGGTGTCTAC
GAACTGCTGA CCGTCACACC CGAAATTCAG ACGATGATCC ACCGCCAGGC CGCTGAATCC
GAGATCAAGG CGTTCGCCAT CGGCCAGGGC ATGCAGACCA TGCGCATGGA TGCCCAGCGC
TGGATCGACA CGGGCGCTAC GTCGCTGGAA GAAGTGCTGC GGGTCACACG CGACTAA
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| Protein sequence | MATHASTTDV STLEPPSQSA VRLVPYAFAR DARLLVARQD VDTLEVWVCP ETSRTALAEL
GRVFGALHLV TLDTAALSTA TQTAYNAQDG SAAQVVGEVE GEVDLSRLMQ DIPAVEDLLE
SEDDAPIIRM INALLTQAAR EGASDIHIEP FENASVVRFR VDGTLRDVVR PKKALHGALI
SRIKIMAQLD IAEKRLPQDG RITLRVGGRP VDVRVSTLPT GHGERAVLRL LDKEAGRLDL
GKLGMGAGTL ARFDHLINQP HGIVLVTGPT GSGKTTTLYA ALSRLDAAST NIMTVEDPIE
YDLDGIGQTQ VNPKIDMTFA KALRAILRQD PDVVMIGEIR DLETAQIAVQ ASLTGHLVLA
TLHTNDSASA VTRLIDMGIE PFLLSSSLLG VLAQRLVRRL CVHCRREEVL ELTPAEVEAV
AGTPIADGVA PAAPARKSVW HHVGCERCSN SGYQGRTGVY ELLTVTPEIQ TMIHRQAAES
EIKAFAIGQG MQTMRMDAQR WIDTGATSLE EVLRVTRD
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