| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3041 |
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| Symbol | |
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| ID | 8020724 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 3209849 |
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| End bp | 3210955 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644831838 |
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| Product | 4-hydroxyphenylpyruvate dioxygenase |
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| Protein accession | YP_002982982 |
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| Protein GI | 241664622 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins |
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| TIGRFAM ID | [TIGR01263] 4-hydroxyphenylpyruvate dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATTCA CGCCTTGGGA AAACCCGATG GGCACCGCCG GCTTCGAGTT CATCGAATAC
GCCGCGCCGG ACCCCGTTGC CATGGGCAAG CTGTTCGAGA ACATGGGCTT TACCGCCATC
GCGAAACACC GTCACAAGAA CGTGACGCTG TACCGCCAGG GCGAGATCAA CTTCATCATC
AACGCCGAGC CCGATTCGTT CGCGCAGCGC TTTGCGCGCC TGCACGGCCC GTCGATCTGC
GCGATCGCGT TTCGCGTGCG AGACGCCGCG TTCGCCTACA AGCGTGCGCT GGAGCTGGGC
GCCTGGGGCT TCGACACCCA CAGCGGCCCG ATGGAGCTGA ACATTCCGGC CATCAAGGGC
ATCGGCGATT CGCTGATCTA CCTGGTCGAC CGCTGGACCG GCAAGAACGA CGCCAAGGCC
GGCGACATCG GCAACATCAG CATCTACGAC GTCGATTTCG TGCCCATCGC GGGCGCCAAC
CCGAACCCCA CCGGGCACGG CCTGACCTAC ATCGACCACC TGACGCACAA CGTCTACCGT
GGCCGGATGA AGGAATGGGC CGAGTTTTAC GAACGCTTCT TCAACTTCCG TGAGGTCCGC
TACTTCGACA TCGAAGGCCA GGTCACGGGC GTGAAGAGCA AGGCGATGAC GAGCCCGTGC
GGCAATATCC GCATCCCCAT CAACGAGGAA GGGACGGAGA AGGCCGGTCA GATCCAGGAG
TATCTGGACA TGTACCACGG CGAGGGCATC CAGCACATCG CGCTCGGTTC GACCAACCTG
TTCAACACGG TGGACGCGCT GCGCAGCAAG GGCATCAAGC TGCTGGACAC GATCGACACG
TATTACGAAC TGGTCGACAA GCGCATCCCC GGCCATGGCG AAGACGTGGC GGAACTGAAG
AAGCGCAAGA TCCTGATCGA CGGCGCACCG GGCGACCTTC TGCTGCAGAT CTTCTCGGAA
AACCAGCTCG GTCCGATCTT CTTCGAGTTC ATCCAGCGCA AGGGCAACCA AGGTTTTGGC
GAGGGCAACT TCAAGGCGCT CTTCGAGTCG ATCGAACTCG ACCAGATGCG CCGCGGCGTG
CTCAAGGCCG ACGACCAGCC GGCCTGA
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| Protein sequence | MQFTPWENPM GTAGFEFIEY AAPDPVAMGK LFENMGFTAI AKHRHKNVTL YRQGEINFII
NAEPDSFAQR FARLHGPSIC AIAFRVRDAA FAYKRALELG AWGFDTHSGP MELNIPAIKG
IGDSLIYLVD RWTGKNDAKA GDIGNISIYD VDFVPIAGAN PNPTGHGLTY IDHLTHNVYR
GRMKEWAEFY ERFFNFREVR YFDIEGQVTG VKSKAMTSPC GNIRIPINEE GTEKAGQIQE
YLDMYHGEGI QHIALGSTNL FNTVDALRSK GIKLLDTIDT YYELVDKRIP GHGEDVAELK
KRKILIDGAP GDLLLQIFSE NQLGPIFFEF IQRKGNQGFG EGNFKALFES IELDQMRRGV
LKADDQPA
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