| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3030 |
|---|
| Symbol | |
|---|
| ID | 8020713 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | - |
|---|
| Start bp | 3200361 |
|---|
| End bp | 3201671 |
|---|
| Gene Length | 1311 bp |
|---|
| Protein Length | 436 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644831827 |
|---|
| Product | glutamate carboxypeptidase |
|---|
| Protein accession | YP_002982971 |
|---|
| Protein GI | 241664611 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAGCCC CGTTGTTGCC CAAGGGTTTG CGCCCTGCCG TGCTCGCCGT CGTCGCATTG
GTCGGTGCGC TGGCTGCCGG CCACGCCGCC GCTGTGCCGC CCGCAGAAAT CTACAAGCGC
GCCCAGCAGG AAAAACCCGC GCTGATCGAC ACCATGAAGA CGCTGGTTTC GATCGAATCG
GGCAGCAAGG ACATCGAAGG CCTGGACAAG ATTGCCGGCG TGGTCGCCGA GCGCCTGCGC
GGCATGGGCG GCGACGTCAA GCTGATCGAC CCCAGCGACC ATGCCTACCG CATGGCGGAC
ACGCCCGAGA AGATCGGCAA GATGGTGCTG GCGCGCTTCA AGGGTGAGGG CAAGCGCAAC
ATCATGCTGA TTGCGCACAT GGACACCGTG TATCTCAAGG GCATGCTCGC GCAGCAGCCG
TTCCGCATCG ACGGCGACCG CGCCTACGGT CTGGGCATTG CCGACGACAA GAACGGCGTG
GCGGTCATCC TGCACACGGT GTCGATTCTG CAGGCCGTCA ATTTCAAGCA ATACGGCACG
CTCACGGTGC TGATCAACGG CGATGAAGAA ATTAGCTCGC CCGGCGCGCG GGCCATACAG
GCCAAGCTGG GCGCCGAGCA GGACGCCGTG TTTTCGTGCG AAGGCACGCG CGTGACGTCG
GACAAGCTGT CGCTGGCCAC CAGCGGCATC GGCGCGATCC TGCTGGATGT AAAGGGCAAG
GCTTCGCACG CGGGCGGCGC GCCGGAGCAG GGCCGCAACG CGCTGTACGA GCTGTCGCAC
CAGGTGCTGC AGATGCGCGA TCTGTCCAAG CCCGAAACGG GCCTGAAGGT GAACTGGACA
GTGGCGCAGG CAGGCACGAA CCGCAACGTG ATCCCGGCCG TCGCCACCGC GCAGGCCGAT
GTGCGTCTGC TGCGCGCCGC CGATGCCGAC AAGCTGGAAG AGACCGTCAA CGAACGCATC
AAGAACAAAC TGATCCCGGA TACGCAGGTC ACAGCCAAGT TCGAGCGCCG CCGCCCGCCG
CTGGAAGCCA CGCCGGCGTC GCGCGCGTTG GCCGAGCACG CCCAGAAGAT CTACGGCGAA
CTCGGCAAGA CGCTGGAGAT TGACGACAAG GCCGAAGGCG GCGGCACCGA TGCCGCGTTT
GCCGCGTCCA AGACCAAGGC GCCTGTGATC GAGCGCTTTG GACTGGCGAG CTTCGGCGCG
CACTCGAACG ACGCCGAATA TGTGGACCTG AACTCCATCG TGCCGCGCCT GTACCTGCTG
ACGCGCATGG TCATGGACGT GTCGCGCGAT CGCGTCGGCC TCACCAAATA A
|
|---|
| Protein sequence | MRAPLLPKGL RPAVLAVVAL VGALAAGHAA AVPPAEIYKR AQQEKPALID TMKTLVSIES
GSKDIEGLDK IAGVVAERLR GMGGDVKLID PSDHAYRMAD TPEKIGKMVL ARFKGEGKRN
IMLIAHMDTV YLKGMLAQQP FRIDGDRAYG LGIADDKNGV AVILHTVSIL QAVNFKQYGT
LTVLINGDEE ISSPGARAIQ AKLGAEQDAV FSCEGTRVTS DKLSLATSGI GAILLDVKGK
ASHAGGAPEQ GRNALYELSH QVLQMRDLSK PETGLKVNWT VAQAGTNRNV IPAVATAQAD
VRLLRAADAD KLEETVNERI KNKLIPDTQV TAKFERRRPP LEATPASRAL AEHAQKIYGE
LGKTLEIDDK AEGGGTDAAF AASKTKAPVI ERFGLASFGA HSNDAEYVDL NSIVPRLYLL
TRMVMDVSRD RVGLTK
|
|---|
| |