Gene Rpic12D_3029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3029 
Symbol 
ID8020712 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3199458 
End bp3200198 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content69% 
IMG OID644831826 
Product(2Fe-2S)-binding domain protein 
Protein accessionYP_002982970 
Protein GI241664610 
COG category[C] Energy production and conversion 
COG ID[COG2080] Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAAC ATCCCTCCGC AGCCCCAAAC GACCCTTCCC GCGAATCGGA TGGATCACCC 
GCCCGCCCCA GCCGGCGTGG CTTCTTGCAA AGCGCGGTGG CCGCGGCATC GGCGTTTGCG
CTGCCGCATG AGTCCGCCGG CGCTCGCCCT CCGGCGCAGG GCGCGGCCCG CCCCGCTGCG
TTGGCGCCAG CGCGGCCGGT CTCGCTCAAT ATCAATGGCA AGCCGTACGC ACTGTCGCTG
GAGCCGCGTG TCACCTTGCT CGACGCGCTG CGCGAGGTGC TGGGGCTGAC GGGGACCAAG
AAAGGTTGTG ACCGCGGCCA GTGCGGCGCA TGCACCGTCC TTGTGAACGG CCGGCGCATC
AACAGTTGCC TGACGCTGGC GATCATGCAC GAAGGCGAGG CCATCACCAC CATCGAGGGC
CTGGCGCACG CGCACGACGG CGTGGTCGAC CGTGCGGCGC TGCATCCGGT GCAGGCGGCG
TTTCTTGAAC ACGACGCGTT CCAGTGCGGC TATTGCACGC CGGGGCAGAT TTGCTCGGCT
GTCGCCGTGT TGGAAGAGGC GCGCCGCGGC ATGCCGAGCG CCGTCACGTC GCCCGCGGCG
CTCGGCAATG ACGGCGCCGT TGCGCTGACC GAAGACGAAA TACGCGAGCG CATGAGCGGC
AACCTCTGCC GCTGCGGCGC GTACCCCAAC ATCGTGGCGG CGATTCGCGT GGTGGCTGCC
AAGTCCGGCA ACGTTGGCTG A
 
Protein sequence
MSEHPSAAPN DPSRESDGSP ARPSRRGFLQ SAVAAASAFA LPHESAGARP PAQGAARPAA 
LAPARPVSLN INGKPYALSL EPRVTLLDAL REVLGLTGTK KGCDRGQCGA CTVLVNGRRI
NSCLTLAIMH EGEAITTIEG LAHAHDGVVD RAALHPVQAA FLEHDAFQCG YCTPGQICSA
VAVLEEARRG MPSAVTSPAA LGNDGAVALT EDEIRERMSG NLCRCGAYPN IVAAIRVVAA
KSGNVG