| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2992 |
|---|
| Symbol | |
|---|
| ID | 8020674 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | + |
|---|
| Start bp | 3156605 |
|---|
| End bp | 3157906 |
|---|
| Gene Length | 1302 bp |
|---|
| Protein Length | 433 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644831789 |
|---|
| Product | metabolite/H+ symporter, major facilitator superfamily (MFS) |
|---|
| Protein accession | YP_002982934 |
|---|
| Protein GI | 241664574 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00883] metabolite-proton symporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATACCT CCAACCCCAA CGAATCCAAG GCCCGCACCG TCTTCCGGGT GGTTAGCGGC
AACTTCCTGG AGATGTACGA CTTCATGGTC TATGGCTATT ACGCCAAGGC CATTGCCGAC
ACCTTCTTCC CCGCCGGCAA CGAGTTCCTC TCGCTGATGC TGTCGCTCGT GACCTTCGGT
GCCGGCTTCC TGATGCGGCC GCTGGGCGCA ATCTTCCTGG GCGCGTACAT CGACCGTCAC
GGCCGTCGCA CGGGGCTGAT CGTCACGCTG GCGCTCATGG CCTGCGGCAC CCTGCTGATC
GCGCTGGTGC CGGGATACGC CACCATCGGG CTGGCGGCGC CGCTGCTGGT GCTGATCGGC
CGGTTGCTGC AGGGCTTCTC GGCTGGCGTG GAGTTGGGCG GTGTGTCGGT CTACCTGGCC
GAAATCGCCA CCCCAGGCAA GAAGGGCTTT TTCGTGAGCT GGCAATCGGC CAGCCAGCAG
GTGGCGGTCA TGTTTGCCGC GCTGCTGGGC GTGCTGATGT CGTACCTGCT GCCGCCGTCT
GAGATGAGCG CATGGGGCTG GCGCGTGCCG TTCCTGATCG GCTGCCTGAT CGTGCCGTTC
CTGTTCATCA TCCGCCGCTC GCTGCAAGAG ACGGAAGAAT TCCAGAAGCG CAAGCACCGT
CCGGACCTGC GCGCCGTGTT CCGCTCGATG GGCCAGAACT GGCGCCTGGT GGGCGCGGGC
ACGCTGATGG TCGTGATGAC CACGGTGTCG TTCTACCTGA TCACCGCCTA CACGCCGACC
TTCGGCAAGA GCGTGCTGCA CCTGTCGGAC ATGGACAGCC TGATCGTCAC GCTGTGCGTG
GGCGCCTCGA ACTTCTTCTG GCTGCCGGTA ATGGGCGCCG TATCTGACCG CGTCGGCCGC
CGCCCGCTAC TGATCCTCTT TACCGTGCTG ATGCTGGTGA CGGCCTACCC GGCCATGCAG
TGGCTGGTTG CTGCACCGTC GTTCGCCCGC ATGCTGACCG TGCTGCTATG GCTGTCGTTC
CTGTACGGCA GCTACAACGG CGCGATGGTC GTCACGCTTA CTGAAATCAT GCCGCCGGAA
GTGCGCACCA CCGGTTTCTC GCTGGCGTAT AGCCTCGCCA CGGCCATCTT CGGCGGCTTT
ACCCCGGCGA TTGCCACATG GCTGATCCAC GAGACGGGCA ACAAGGCCAT GCCCGGCGTG
TGGGTGTCGT TCGCTGCCCT GTGCGGGTTG ATTGCCACGC TGGCGATCGT CAAGCCGGCG
GGCAGGCATG AGCATGGGGC GGGCACGGCG CCTGTTGCCT GA
|
|---|
| Protein sequence | MHTSNPNESK ARTVFRVVSG NFLEMYDFMV YGYYAKAIAD TFFPAGNEFL SLMLSLVTFG
AGFLMRPLGA IFLGAYIDRH GRRTGLIVTL ALMACGTLLI ALVPGYATIG LAAPLLVLIG
RLLQGFSAGV ELGGVSVYLA EIATPGKKGF FVSWQSASQQ VAVMFAALLG VLMSYLLPPS
EMSAWGWRVP FLIGCLIVPF LFIIRRSLQE TEEFQKRKHR PDLRAVFRSM GQNWRLVGAG
TLMVVMTTVS FYLITAYTPT FGKSVLHLSD MDSLIVTLCV GASNFFWLPV MGAVSDRVGR
RPLLILFTVL MLVTAYPAMQ WLVAAPSFAR MLTVLLWLSF LYGSYNGAMV VTLTEIMPPE
VRTTGFSLAY SLATAIFGGF TPAIATWLIH ETGNKAMPGV WVSFAALCGL IATLAIVKPA
GRHEHGAGTA PVA
|
|---|
| |