| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2986 |
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| Symbol | |
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| ID | 8020668 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 3148571 |
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| End bp | 3150316 |
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| Gene Length | 1746 bp |
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| Protein Length | 581 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644831783 |
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| Product | putative signal peptide protein |
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| Protein accession | YP_002982928 |
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| Protein GI | 241664568 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACAT CCTGGCGCAT GACGCTTCAG ATCAGTGCCA TCGCACTGGC AAGCGCCCTG
GCAGTCGGCG CAGCCCATGC CGGCGAAGCC GAAGCCAAAA AGTGGATCAG CAGCGAATTC
CAGCCCAGCA CGCTGTCGCA AGACAAGCAG ATGGCGGAAA TGAAGTGGTT CATGGACGCC
GCAGCCAAGC TCAAGGCCAA GGGCGTAACC GAAATCCACG TCGTGTCGGA AACGCTCGAC
ACGCACGCGT ATGAATCGAA GACGCTGGCC AAGGCCTTCG AAGAAATCAC CGGCATCAAG
GTCAAGCACG ACATCATGCA GGAAGGCGAT GTCGTCGAAA AACTGCAGAC CTCGATGCAA
TCGGGCAAGA GCATCTATGA CGGCTGGATT TCCGACTCCG ACCTGATCGG CACGCACTAC
CGCTACGGCG TGATCATGCC GCTGTCCGAT TACATGGCGG GTGAAGGCAA GGAGTTCACC
AACCCGGGCC TGGACCTGAA GGATTTCATC GGCACGAGTT TCACCACCGC GTCCGACGGC
AAGCTGTATC AGCTGCCCGA CCAGCAGTTC GCCAACCTGT ACTGGTTCCG CGCCGACTGG
TTCGCCCGCA AGGACCTGCA GGACAAGTTC AAGGCCAAGT ACGGCTACGA CCTGGGCGTG
CCCGTCAACT GGACGGCCTA TGAAGACATC GCCAACTTCT TCACCAACGA CGTGAAGGAG
CTGGACGGCA AGCGCGTCTA CGGCCACATG GACTACGGCA AGAAGGATCC GTCGCTCGGC
TGGCGCTTTA CCGATGCATG GCTGTCGATG GCCGGCTCCG CCGACAAGGG CATCCCGAAC
GGCCTGCCGG TGGACGAATG GGGCATCCGC GTGGATGACA AGGACAAATG CACTCCGGTG
GGCGCATCGG TCTCGCGCGG CGGCGCCACC AACAGCCCGG CCGCGGTGTA CGCCCTCGCG
AAGTACATCG ACTGGATGAA GAAGTACGCC CCGCCTGAAG CGACCGGCAT GACCTTCAAC
GAAGCCGGCC CGGTGCCCGC ACAAGGCCAC ATCGCCCAGC AGGTGTTCTG GTACAGCGCC
TTCACCGCGC CGATGACCAA ACCGGGCCCG GTCGTGAACG CCGACGGTTC GCCGAAGTGG
CGCATGGCCC CGTCGCCGCA CGGCCCGTAC TGGAAAGACG GCATGCAGAA CGGCTACCAG
GACGTCGGCT CGTGGACGTT CTTCAAATCC ACCCCGTTCG AGCGCCGCTC GGCTGCGTGG
CTGTACGCCC AGTTCGTCAC GTCGAAGACG GTGTCGCTCA AGAAGTCGAT CACCGGTCTC
ACGTTCATTC GTGACTCCGA TATCCACAGC GACTACTTCA CCAAGAACGC GGCCAAGTAC
GGCGGCCTGA TCGAGTTCTA CCGCAGCCCG GCCCGCGTGG CCTGGACGCC GACCGGCAAC
AACGTGCCCG ACTATCCGAA GCTGGCGCAG CTCTGGTGGA AGAACGTCGC CACGGCCGTC
ACGGGCGAGA AGACGCCGCA AGGCGCGATG GACAACCTGG CCAAGGAAAT GGACCAGGTG
ATGGGCCGCC TGCAGCGCGC CGGCATGAAG AACTGCGCGC CGAAGCTGAA CCCGGAAAGC
GATCCGTCGA AGTGGCTGTC GACCGAACAC GCCCCCTGGA AGAAGCTCGA CAACGAGCGT
CCGAAGGGTG AGACGGTGGC CTACGACAAG CTGCTCGCAG CCTGGAAGGC CGGCAAGGTA
CGTTAA
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| Protein sequence | MKTSWRMTLQ ISAIALASAL AVGAAHAGEA EAKKWISSEF QPSTLSQDKQ MAEMKWFMDA
AAKLKAKGVT EIHVVSETLD THAYESKTLA KAFEEITGIK VKHDIMQEGD VVEKLQTSMQ
SGKSIYDGWI SDSDLIGTHY RYGVIMPLSD YMAGEGKEFT NPGLDLKDFI GTSFTTASDG
KLYQLPDQQF ANLYWFRADW FARKDLQDKF KAKYGYDLGV PVNWTAYEDI ANFFTNDVKE
LDGKRVYGHM DYGKKDPSLG WRFTDAWLSM AGSADKGIPN GLPVDEWGIR VDDKDKCTPV
GASVSRGGAT NSPAAVYALA KYIDWMKKYA PPEATGMTFN EAGPVPAQGH IAQQVFWYSA
FTAPMTKPGP VVNADGSPKW RMAPSPHGPY WKDGMQNGYQ DVGSWTFFKS TPFERRSAAW
LYAQFVTSKT VSLKKSITGL TFIRDSDIHS DYFTKNAAKY GGLIEFYRSP ARVAWTPTGN
NVPDYPKLAQ LWWKNVATAV TGEKTPQGAM DNLAKEMDQV MGRLQRAGMK NCAPKLNPES
DPSKWLSTEH APWKKLDNER PKGETVAYDK LLAAWKAGKV R
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