Gene Rpic12D_2969 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2969 
SymbolrplJ 
ID8020641 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3127183 
End bp3127689 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content63% 
IMG OID644831756 
Product50S ribosomal protein L10 
Protein accessionYP_002982911 
Protein GI241664551 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0244] Ribosomal protein L10 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.45658 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCACTCA ATCTCGAAGA TAAGAAGGCC GTCGTGGCCG AGGTAACGGC GCAAGTCGCC 
AAGGCCTCGA CCATCGTCGT TGCTGAATAT CGCGGTATCA CGGTTGGCGA TCTGACCAAG
CTGCGCGCGC AAGCGCGCCA GCAAGGCGTT TACCTGCGCG TTCTGAAGAA CACGCTGGCA
CGCCGCGCTG TTGAAGGCAC GCCGTTTGCC GAACTCGCCG AGCAACTGAC TGGCCCGCTG
ATCTACGGTA TTTCCGAAGA CGCAGTGGCC CCGGCCAAGG TGCTGAACGA TTTCGCCAAA
GGCAATGACA AGCTGGTGCT GCGCGCCGGT TCGTACGATG GCAAGGTTCT CGACGTCGAC
GCCGTGAAGG CGCTGGCAAC GATTCCGAGC CGCGAAGAAC TGCTCAGCAA GCTGCTGTTC
GTCATGCAGG CTCCGGTGTC GGGCTTTGCC CGCGCCCTGG GTGCCCTGGC TGCCAAGCAA
GGCGAAGGCG AGGCTGCAGC GGCCTAA
 
Protein sequence
MALNLEDKKA VVAEVTAQVA KASTIVVAEY RGITVGDLTK LRAQARQQGV YLRVLKNTLA 
RRAVEGTPFA ELAEQLTGPL IYGISEDAVA PAKVLNDFAK GNDKLVLRAG SYDGKVLDVD
AVKALATIPS REELLSKLLF VMQAPVSGFA RALGALAAKQ GEGEAAAA