| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2951 |
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| Symbol | rpsJ |
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| ID | 8020623 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 3096653 |
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| End bp | 3096964 |
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| Gene Length | 312 bp |
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| Protein Length | 103 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644831738 |
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| Product | 30S ribosomal protein S10 |
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| Protein accession | YP_002982893 |
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| Protein GI | 241664533 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0051] Ribosomal protein S10 |
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| TIGRFAM ID | [TIGR01049] ribosomal protein S10, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000133875 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000000722255 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCAGAACC AGAAGATCCG TATCCGCCTG AAGGCTTTCG ACTATCGCCT GATCGACCAG
TCGGCCGCTG AAATCGTCGA GACCGCCAAG CGCACCGGCG CGATCGTCAA GGGCCCGGTG
CCCCTGCCGA CTCGCATCCA GCGTTTCGAC GTTCTGCGTT CGCCGCACGT CAACAAGACC
AGTCGCGACC AGTTCGAAAT CCGCACGCAC CAGCGCCTGA TGGACATCGT CGACCCGACG
GATAAGACTG TCGACGCGCT GATGAAGCTG GACCTGCCGG CCGGTGTGGA CGTCGAGATC
AAGCTGCAAT AA
|
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| Protein sequence | MQNQKIRIRL KAFDYRLIDQ SAAEIVETAK RTGAIVKGPV PLPTRIQRFD VLRSPHVNKT
SRDQFEIRTH QRLMDIVDPT DKTVDALMKL DLPAGVDVEI KLQ
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