| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2916 |
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| Symbol | |
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| ID | 8020588 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 3073437 |
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| End bp | 3074624 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644831703 |
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| Product | cytochrome c-type biogenesis protein CcsB |
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| Protein accession | YP_002982858 |
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| Protein GI | 241664498 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0755] ABC-type transport system involved in cytochrome c biogenesis, permease component |
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| TIGRFAM ID | [TIGR03144] cytochrome c-type biogenesis protein CcsB |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.652315 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00362581 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAAGCGA CCAATCCCCA AACGACCGTG GCGAGCGCTG ATCTGGGTGC GCTGAAGCGT
GCGTCGTATT TCCGCCGCCT GGGCTGGTTT GACTGGCTGT TTGCTGCAAT GCTGGCCGCC
GGCGCCGGTT ACGCCTTCTC GCGCTACGGG GCCTACATGG ACGGCTACGA GCGCGGCATT
CTCGTTGCCG CAGTGCCTGC CTTCGCATGG CTGGGCTGGA CGTGGAAGCC GGTGCGCGTA
CTGATGATCG GCATCGCCGT GTTGTCGCTG TTCGGCATCA CGCAATACGC CGGCGCCAAT
GGGCCGGATC TCGCCCGCGC TGAACACGCC TTCTTCCTCA AGTATTTCCT TGCCAGCCAG
TCCGCCATCC TGTGGATGAG CGCGCTGATC TTCCTGTCCA CGCTGTTCTT CTGGACTGGG
CTGGCGCTGC GCTGGGAAGC GGGCGGGGCC ATCGGCAGCA AGCTGTGCTG GGCAGCGGTG
GTGCTGGGCC TGACCGGCAT GTTGGTGCGA TGGTACGAGT CGTACCTGGT CGGCGCAGAC
ATTGGTCACA TCCCCATCTC GAATCTGTAC GAGGTGTTCA TCCTCTTTAC GTTGATCACC
TCGCTCTTCT ATCTGTACTA CGAGCAGCGT TACAAGACGC GCGCGCTGGG CCCCTTCGTG
ATGCTGGTGG TGTCGGCGGC GGTGGGCTTT CTGCTGTGGT ACACGGTGTC GCGCGGCGCG
CAGGAGATCC AGCCGCTGGT GCCGGCATTG CAGAGCTGGT GGATGAAGAT CCACGTACCG
GCCAATTTCA TCGGCTACGG CACGTTCGCC CTGTCGGCCA TGGTCGGTGC GGCTTATCTG
CTGAAGGAGC ACGGCGTGCT GGCCGATCGG CTCCCGTCCC TCGAGGTGCT GGACGACGTG
ATGTACAAGG CCATCACCGT TGGATTTGCG TTCTTCACGA TCGCCACGAT TCTCGGCGCG
CTGTGGGCGG CTGACGCCTG GGGCGGCTAC TGGAGCTGGG ATCCGAAGGA AACCTGGGCG
CTGATCGTTT GGCTGAACTA CGCCGCCTGG CTGCACATGC GCCTGATGAA GGGCCTGCGT
GGTCGCATGG CGGCCTGGTG GGCGCTGATC GGCCTGTTGG TGACGACGTT CGCCTTCCTC
GGTGTGAACA TGTTCCTCTC GGGCCTGCAC AGCTACGGCG AGCTGTAA
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| Protein sequence | MEATNPQTTV ASADLGALKR ASYFRRLGWF DWLFAAMLAA GAGYAFSRYG AYMDGYERGI
LVAAVPAFAW LGWTWKPVRV LMIGIAVLSL FGITQYAGAN GPDLARAEHA FFLKYFLASQ
SAILWMSALI FLSTLFFWTG LALRWEAGGA IGSKLCWAAV VLGLTGMLVR WYESYLVGAD
IGHIPISNLY EVFILFTLIT SLFYLYYEQR YKTRALGPFV MLVVSAAVGF LLWYTVSRGA
QEIQPLVPAL QSWWMKIHVP ANFIGYGTFA LSAMVGAAYL LKEHGVLADR LPSLEVLDDV
MYKAITVGFA FFTIATILGA LWAADAWGGY WSWDPKETWA LIVWLNYAAW LHMRLMKGLR
GRMAAWWALI GLLVTTFAFL GVNMFLSGLH SYGEL
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