| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2907 |
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| Symbol | |
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| ID | 8020579 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 3065161 |
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| End bp | 3067494 |
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| Gene Length | 2334 bp |
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| Protein Length | 777 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644831694 |
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| Product | penicillin-binding protein, 1A family |
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| Protein accession | YP_002982849 |
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| Protein GI | 241664489 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5009] Membrane carboxypeptidase/penicillin-binding protein |
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| TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0114663 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGGCC TGTTCGTTGC GATGGGGGTC GTCGGGGCGC TGCTGCTGGG CTATGCCCTG
CTCGTCGCCG CGCCCAACCT GCCGTCGCTC GACGCCATCA CCGATTACCG TCCGAAGATT
CCGCTGCGCG TCTACACCGC CGATAACGTC CTCATCGGTG AATTCGGTGA GGAGCGCCGC
AGCTTCGTAC CGATCACGCA GATGCCCGAT GTGATGAAGC GCGCGGTCCT GGCGATCGAA
GACGACCGCT TCTACGAACA CGGCGGCGTC GACTTCATCG GCGTGCTGCG CGCGGGCCTG
GCGAACCTGC ATGGCGGTCT CTCTCAAGGT GCGTCGACCA TCACGATGCA GGTGGCGCGC
AACTTCTTCC TGTCGAGCGA GAAGACGTAC ACGCGCAAGA TTTACGAGAT CTTGCTCTCG
TACAAGATCG AGGCGAGCCT GACAAAGGAT CAGATCCTCG AGCTGTACAT GAACCAGATC
TACCTGGGCC AGCGTGCATA CGGCTTTGCC AGCGCCGAGC AGATCTACTT CGGCAAGAAC
ATCAAGGACA TCACCCTGGC CGAAGCGGCC ATGCTGGCCG GCCTGCCCAA GGCGCCATCG
GCGTACAACC CCGTGGTGAA CCCCAAGCGC GCCAAGGTGC GTCAGGAGTA CATCCTGCAA
CGCATGCGCG ACCTGCACTA CATCACGCCG GAGCAGTACA CCCAGGCTGT CAATGAGCAA
CTGCCGGTGC GTGGCGAGGG CCATGAGTTC GACGTGCACG CCGAATACGT GGCCGAAATG
GTACGCCAGC TCATGTACGC GCAATACCGC GAAGAAACCT ACACGCGCGG GCTGAACGTC
TACACCACGC TGCGCAAGGC CGACCAGGAC GTCGCCTATC AATCCGTGCG CCGCGGCATT
CTCGATTACG AGCGCCGTCA CGGCTATCGC GGCCCTGAAG CGTTCATCGA CCTGCCCTCC
GATGCAGAGG AGCGTGAACA GGCCATCGAC GACGCCCTGC TGGAACACCC GAACAGCGAC
GATCTGCAAT CGGCCGTGGT GGTGAGCGTG ACACCCAAGC TGGTGCGCGC GACGATGCTG
ACCGGTGAGA CGATCGACCT GGCAGGCGAC GGCCTGCGCT TTGCACAGGC GGCCCTGTCG
AACAATGCAC AGCCCAAGAT CAAGCTGCGC CCGGGCGCGG TGATCCGTGT GATCGAGGAC
ACGAAGACGC AGAAGTGGTC GATCACGCAA TTGCCGGAAG TGGCCTCGGG TTTCATCTCG
CTGGATCCGC AGACGGGCGC GATCTACTCG ATGGTGGGTG GCTTCGATTT CAACCGCAGC
AAGTTCAACC ACGTCACGCA GGCCTGGCGC CAGCCGGGTT CGAGCTTCAA GCCGTTCATC
TACTCGGCGG CGGTGGACAA GGGTTTCTCG CCGTCTACGG TCATCAACGA CGCGCCGCTC
TCGATCCCGA CCGGCGACAC GGGCGGCCAG GTGTGGGAGC CGAAGAACTA CGGCGGCGGC
TATGACGGCC CGATGACGAT GCGCCGCGCG CTGCAGAAAT CGAAGAACCT GGTGTCGGTG
CGGATCCTGC GCGCGATTGG TACGCAGTAC GCGCAGCAGT ACATCACCCG CTTCGGCTTC
GACGCCGATC GGCACCCGGC CTATCTGCCG ATGGCGCTGG GCGCAGGCTC GGTGACGATG
CTGCAGATGG CGAGCGGCTA CTCGGTGTTC GCCAACGGCG GCTACCGCGT GAACCCGTAC
ATCATCGATC GCGTGGTGGA TGCGCGCGGC ACGGTCGTCC AGCAAAGCCA TCCGATGACC
GCCGGCAAGG ACGCCGTGCG CGTGATCGAT CCGCGCAACG ATTTCATCAT GGATTCACTG
CTGCGCAGCG TGGTGTCGAA CGGCACGGGC TACCAGGCCA AGGTCAAGCT GGGCCGCAAC
GACATGGCAG GCAAGACCGG CACCACCAAC GACTCGTTCG ACGCCTGGTT TTGCGGCTAC
ACGCCCAAGC TGGTCGGCGT GGCCTGGATG GGCTACGACA ACCCGCGCAG CCTGGGGGAT
CGCGAAACCG GTGGCGGCCT GGCCCTGCCG ATCTGGATCA ACTACATGAG CTACGCGCTC
AAGGGCGAAC CCCAGACCGA GCGCCAGCCG CCCGAAGGCG TCGTGCAGAT GGCCGGCGAC
TGGGCTTACG AGGAATACGC CAACGGCCAG GGCGTGGCCT CGGTTGGCCT GGGCGATGCG
ATGCCGGGAG GCTCCGCACC GGCCGGCGAT CAATCGCAAC AGCCTGGCAT CAACCTGGCG
CCGACGCAGG AACAGGAGAA ACAGAAGATT CTCGACATGT TCCGCGGCAA CTGA
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| Protein sequence | MLGLFVAMGV VGALLLGYAL LVAAPNLPSL DAITDYRPKI PLRVYTADNV LIGEFGEERR
SFVPITQMPD VMKRAVLAIE DDRFYEHGGV DFIGVLRAGL ANLHGGLSQG ASTITMQVAR
NFFLSSEKTY TRKIYEILLS YKIEASLTKD QILELYMNQI YLGQRAYGFA SAEQIYFGKN
IKDITLAEAA MLAGLPKAPS AYNPVVNPKR AKVRQEYILQ RMRDLHYITP EQYTQAVNEQ
LPVRGEGHEF DVHAEYVAEM VRQLMYAQYR EETYTRGLNV YTTLRKADQD VAYQSVRRGI
LDYERRHGYR GPEAFIDLPS DAEEREQAID DALLEHPNSD DLQSAVVVSV TPKLVRATML
TGETIDLAGD GLRFAQAALS NNAQPKIKLR PGAVIRVIED TKTQKWSITQ LPEVASGFIS
LDPQTGAIYS MVGGFDFNRS KFNHVTQAWR QPGSSFKPFI YSAAVDKGFS PSTVINDAPL
SIPTGDTGGQ VWEPKNYGGG YDGPMTMRRA LQKSKNLVSV RILRAIGTQY AQQYITRFGF
DADRHPAYLP MALGAGSVTM LQMASGYSVF ANGGYRVNPY IIDRVVDARG TVVQQSHPMT
AGKDAVRVID PRNDFIMDSL LRSVVSNGTG YQAKVKLGRN DMAGKTGTTN DSFDAWFCGY
TPKLVGVAWM GYDNPRSLGD RETGGGLALP IWINYMSYAL KGEPQTERQP PEGVVQMAGD
WAYEEYANGQ GVASVGLGDA MPGGSAPAGD QSQQPGINLA PTQEQEKQKI LDMFRGN
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