Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_2900 |
Symbol | aroB |
ID | 8020572 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 3057733 |
End bp | 3058839 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644831687 |
Product | 3-dehydroquinate synthase |
Protein accession | YP_002982842 |
Protein GI | 241664482 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0337] 3-dehydroquinate synthetase |
TIGRFAM ID | [TIGR01357] 3-dehydroquinate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.146748 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTACCG TTGATGTTGA CCTTGGCGAT CGCGCCTATC CGATCCATAT CGGCTCGGGG CTGTTGTCCA AGGCCGAGTT GTTTGCCCCA CACATTCGCG GCGCGCGTGC CGTGATCGTC ACCAACGAGA CCGTCGCACC GTTGTATGCG GCGAAGGTCG AAGCGGCCAT TCGTTCGCTC GGCAAGGCGG TCGACACGGT TGTATTGCCT GATGGGGAAT CGTTCAAGAA GTGGGACACG CTCAACCGCA TCTTTGATGC GCTGTTGAAG GCGGGTGCGG ATCGCAAGAC CACGCTGATC GCGCTGGGCG GCGGCGTTGT CGGCGACATG ACCGGCTTTG CCGCCGCCTG CTACATGCGC GGTGTGCCGT TCATCCAGGT GCCGACGACG CTGCTCTCAC AAGTCGACTC TTCGGTGGGC GGCAAGACGG GCATCAACCA CCCGCTGGGC AAAAACATGA TCGGCGCGTT CCACCAGCCG CAGGCGGTGC TGGCCGATAT CGATACGCTG CGCACGTTGC CTGCCCGAGA GCTGGCGGCC GGTATGGCCG AGGTCATCAA GCATGGCGCA ATCGCCGATG CGGGGTACTT CGCCTGGATC GAGCAAAACA TCAAGGGTCT CAACGGTTGC GATACCGGCC TGATGGCCGA AGCCGTGCGT GGCTCGGTGC GCATCAAGGC CGCAGTCGTG GCACAGGATG AGCGCGAGAC CGGCCTGCGT GCCACCCTCA ATTTCGGTCA CACCTTTGGC CACGCCATCG AGGCCGGCCT GGGCTACGGT GAATGGCTGC ACGGCGAAGC CGTCGGCTGT GGCATGGTGA TGGCGGCGGA TCTGTCGCAT CGACTGGGCT TTATCGACAT CGACACGCGC AACCGCATCA CCGCGCTCAC GCGTGCGGCG AACCTGCCGA CGGTGGCGCC GGACCTCGGC GTTGATCGCT TCATCGACCT GATGCGCGTC GACAAGAAGG CCGAAGCCGG CGAGATCAAG TTCGTGCTGC TGCGCAAGCT GGGCCAGGCT TTCGTGACCG CGGTGCCCGA TGCGGACTTG CGCGCCACCT TGCAGCACGC CGTCCTGCGA CCACCGACCG AAGCACCCAT CGCCTGA
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Protein sequence | MITVDVDLGD RAYPIHIGSG LLSKAELFAP HIRGARAVIV TNETVAPLYA AKVEAAIRSL GKAVDTVVLP DGESFKKWDT LNRIFDALLK AGADRKTTLI ALGGGVVGDM TGFAAACYMR GVPFIQVPTT LLSQVDSSVG GKTGINHPLG KNMIGAFHQP QAVLADIDTL RTLPARELAA GMAEVIKHGA IADAGYFAWI EQNIKGLNGC DTGLMAEAVR GSVRIKAAVV AQDERETGLR ATLNFGHTFG HAIEAGLGYG EWLHGEAVGC GMVMAADLSH RLGFIDIDTR NRITALTRAA NLPTVAPDLG VDRFIDLMRV DKKAEAGEIK FVLLRKLGQA FVTAVPDADL RATLQHAVLR PPTEAPIA
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