Gene Rpic12D_2899 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2899 
Symbol 
ID8020571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3056547 
End bp3057713 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content63% 
IMG OID644831686 
Productdeoxyguanosinetriphosphate triphosphohydrolase-like protein 
Protein accessionYP_002982841 
Protein GI241664481 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0232] dGTP triphosphohydrolase 
TIGRFAM ID[TIGR00277] uncharacterized domain HDIG
[TIGR01353] deoxyguanosinetriphosphate triphosphohydrolase, putative 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.133919 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGACC GATTTGATGT GCCGTCCGCG CCGTTCGATC TCGAAGGCCC TCTCGCTCCC 
TACGCCGCGC ATTCGGCGCA GACGCGCGGC CGCGTCCACG CCGAGCCGCC GTCCACGTCG
CGCACCGAGT TCCAGCGTGA CCGCGATCGC ATCATCCACA GCACCGCTTT CCGCCGGCTC
GAATACAAGA CGCAGGTCTT CGTGAATCAC GAGGGCGACC TGTTCCGGAC GCGGCTCACG
CACAGTCTGG AAGTCGCGCA GATCGCCCGT TCGATCGCGC GCAGCCTGCG CCTGAACGAG
GATCTCGTCG AAGCGATTTC GTTGGCACAT GATCTGGGCC ACACGCCGTT CGGCCATGCC
GGGCAGGATG CGCTGAACGA TTGCATGAAG CCGTACGGCG GGTTCGAGCA CAACCTGCAG
AGCCTGCTCG TGGTCGATCG GCTGGAAGAG CGCTACGGCG GTTTCGACGG GCTGAACCTG
ACGTTCGAAA CGCGCGAGGG CATCCTCAAG CATTGTTCCC GCAATAACGC GGCGACGCTG
GGTGACTTGG GGCGGCGCTT TCTCGAAGGG CAGCAGCCTT CGCTGGAGGC GCAGCTCGCC
AACCTCGCCG ATGAGGTCGC GTACAACAAC CACGACATCG ACGACGGCCT ACGCTCCGGC
CTGATTACGC TGGAGCAACT CGAAGACGTG CCGCTGTGGG CCATCCATCG GCGCGAAGCC
GAGGCGGCAT TTCCGGACGT TAGCGGCCGA CGCCTGATCA ACGAAACCAT TCGTCGCATC
ATCAACGCGC TGATCGTCGA TCTGATCGGC ACCACGCGCA CGGGCATCGC TGAAGTGGCG
CCGCAATGCA TCGACGATGT GCGCGCCGCG CCGCCGCTTG TTGCGTTCTC CGAGCCGATG
CGCGAAGAGG CGCGCGCGCT CAAGCGTTTC CTGTTCGATA ACCTGTATCG GCATTACCTC
GTGATGCGCA TGGCGGCCAA GGCACGCCGC ATCATCGACG ATCTGTTCGG CGCGTTCATG
GATGACCCGC GTCTGCTGCC GCCGCAATAC CAGGCAAAAG CCAACCCTGA AGAGCAGCCG
CGCTGGATTG CGCATTACAT TGCCGGCATG ACGGATCGCT ATGCCATCAA GGAGCATCGC
CGCATCTTTG CGGTGGATGC AGTTTGA
 
Protein sequence
MNDRFDVPSA PFDLEGPLAP YAAHSAQTRG RVHAEPPSTS RTEFQRDRDR IIHSTAFRRL 
EYKTQVFVNH EGDLFRTRLT HSLEVAQIAR SIARSLRLNE DLVEAISLAH DLGHTPFGHA
GQDALNDCMK PYGGFEHNLQ SLLVVDRLEE RYGGFDGLNL TFETREGILK HCSRNNAATL
GDLGRRFLEG QQPSLEAQLA NLADEVAYNN HDIDDGLRSG LITLEQLEDV PLWAIHRREA
EAAFPDVSGR RLINETIRRI INALIVDLIG TTRTGIAEVA PQCIDDVRAA PPLVAFSEPM
REEARALKRF LFDNLYRHYL VMRMAAKARR IIDDLFGAFM DDPRLLPPQY QAKANPEEQP
RWIAHYIAGM TDRYAIKEHR RIFAVDAV