Gene Rpic12D_2884 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2884 
Symbol 
ID8020556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3038824 
End bp3040188 
Gene Length1365 bp 
Protein Length454 aa 
Translation table11 
GC content65% 
IMG OID644831671 
ProductUDP-N-acetylglucosamine 1-carboxyvinyltransferase 
Protein accessionYP_002982826 
Protein GI241664466 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0766] UDP-N-acetylglucosamine enolpyruvyl transferase 
TIGRFAM ID[TIGR01072] UDP-N-acetylglucosamine 1-carboxyvinyltransferase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0645452 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAGC TTGATCCTAC CCCGGTTACC GTTTCAACGG ATTCCGACCT TGCGCTCGCC 
GAGCGCCCCT TCCACAGTGA TCGACGAGAC GTCTCGCTCA TGGACAAACT GCTGATCGAA
GGCAATGGCC CGCTCTCGGG CGAAATCCGC GTGTCTGGCG CCAAGAACGC CGCGCTGCCC
ATCATGTGTG CCGCGCTGCT GACGGCCGAG CCGCTGGCGC TGAGCAACGT GCCGAATCTG
CAGGACGTGC GCACGATGCT CAAGCTGCTG CGCCAGATGG GCGTGGAAGG CGTGCTCGAC
GGTCACAACC TCACGCTCGA CGCTGCCACC ATCCACACGC CCGAAGCTTC GTACGACCTG
GTGAAGACCA TGCGTGCGTC GATCCTGGTG CTGGGCCCGC TGCTGGCGCG CTTCGGCCAT
GCGCGTGTGT CGCTGCCGGG CGGTTGCGGC ATCGGCGCGC GTCCGGTGGA TCAGCACATC
AAGGGGCTGC AATTGATGGG CGCCGAGATC GTCATCGAGC ACGGCTACAT TGAAGCCAAG
CTTGCCGATG GCGCAAAGCG TCTGCGCGGC GCGCGCATCG TCACCGACAT GGTGACGGTC
ACGGGTACGG AAAACCTGCT GATGGCAGCC GCGCTTGCCG ACGGCGAGAC CGTGCTGGAA
AACGCCGCGC GCGAGCCTGA GGTCACCGAC CTCGCCAATC TGCTCGTGAA GATGGGCGCG
CGCATCGAAG GCATCGGCAC CGACCGCCTG GTCATCCAGA GTGTTGAAGC GCTGCACGGC
GCCGCGCACA CGGTGATTGC CGATCGTATT GAAGCCGGCA CATTCCTGTG TGCCGTGGCT
GCGGCCGGTG GCGACGTGAC GCTGCGCGCC GTGCCGCCCG GCATTCTCGA TGCCGTGCTC
GACAAGCTGC GCGAAGCCGG CGTGACGCTC ACCACGGGCG ATGACTGGAT CCGTGTGCAG
ATGACCGGCC GCCCGAAGGC GGTGAGCTTC CGCACGTCGG AATACCCGGC GTTCCCGACC
GACATGCAGG CTCAGTTCAT GATGCTCAAC GCCATCGCCG AGGGCTCTGC CACGGTGACG
GAGACCATCT TCGAAAACCG CTTCATGCAC GTGCAGGAAC TGAACCGCCT GGGCGCCAAT
ATCGTGATCG AAGGCAAGAC GGCGGTGGTG ACGGGCGTCG AGCAATTGTC GGGTGCAACC
GTCATGGCCA CCGACCTGCG CGCCTCGGCC AGCCTCGTCA TCGCCGGGCT GATCGCGCAG
GGCGAGACGC TGGTCGACCG CATCTATCAT CTTGATCGCG GTTACGACCG CATCGAAGAC
AAGCTGTCCG CCGTCGGCGC CAAGATCCGC CGCATCCAGG GGTAA
 
Protein sequence
MAELDPTPVT VSTDSDLALA ERPFHSDRRD VSLMDKLLIE GNGPLSGEIR VSGAKNAALP 
IMCAALLTAE PLALSNVPNL QDVRTMLKLL RQMGVEGVLD GHNLTLDAAT IHTPEASYDL
VKTMRASILV LGPLLARFGH ARVSLPGGCG IGARPVDQHI KGLQLMGAEI VIEHGYIEAK
LADGAKRLRG ARIVTDMVTV TGTENLLMAA ALADGETVLE NAAREPEVTD LANLLVKMGA
RIEGIGTDRL VIQSVEALHG AAHTVIADRI EAGTFLCAVA AAGGDVTLRA VPPGILDAVL
DKLREAGVTL TTGDDWIRVQ MTGRPKAVSF RTSEYPAFPT DMQAQFMMLN AIAEGSATVT
ETIFENRFMH VQELNRLGAN IVIEGKTAVV TGVEQLSGAT VMATDLRASA SLVIAGLIAQ
GETLVDRIYH LDRGYDRIED KLSAVGAKIR RIQG