Gene Rpic12D_2881 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2881 
Symbol 
ID8020553 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3035661 
End bp3036785 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content64% 
IMG OID644831668 
Producthistidinol-phosphate aminotransferase 
Protein accessionYP_002982823 
Protein GI241664463 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase 
TIGRFAM ID[TIGR01141] histidinol-phosphate aminotransferase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0576807 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCCA CAGCTCCGGC CCAAGCCTCT CTGGATGACC TACTCGCCCG CATCGTGCGC 
GACGACGTCC GCGCCATGGG CGCGTACCAC GTGCCCGACG CGACCGGCAT GGTCAAGCTG
GACGCGATGG AAAACCCATA TCTGCTGCCG GCGATGCTGC GCGACGCGCT GGGCAAGCGC
CTGGCCGAAG TCGCGCTCAA CCGCTACCCG GTGCCGACCG CCGACGCGTT AAAGGCGCAG
CTCAAGCAGG TGATGCATGT GCCGGCCGGT GCCGAGGTGC TGCTGGGCAA TGGTTCGGAC
GAGATCATCA GCCTGATCGC CATTGCGGCG GCCAAGCCGG GCGCGACCGT GCTGGCGCCG
GTGCCGGGTT TCGTGATGTA CGCGATGTCG GCGCAGCTGC TGGGCCTGAA CTTTGTCGGC
GTACCCCTCA AGGCAGACCT GACGCTGGAC CGTGAAGCGA TGCTGGCGGC CATGGCCGAA
CATCAGCCCG CCGTCATCTA CCTGGCGTAT CCGAACAACC CGACGGGCAA CCTGTTCGAC
GCGGCCGACA TGGACGCGAT CATCCGCGCC GCGCGCGGCC CGGTCTGCCA GAGCCTGGTG
GTGGTCGACG AGGCGTACCA GCCGTTCGCG CAACATAGCT GGATGCCGCG CCTGCGCGAT
TTCGATCACC TGTTGGTGAT GCGCACCGTC TCCAAGCTGG GCTTGGCGGG CATTCGTCTG
GGCTACGTAG CCGGCCACCC GAAGTGGATT GCCGAGCTGG ACAAGGTGCG CCCGCCGTAC
AACATCAATG TGCTGACCGA GGCCACCGCC CAGTTCATGC TCGAACACGT GGACGTGCTG
GATGCCCAGG CAGCGACTTT GCGGGCCGAG CGCACCAAGC TGATCGACGC GCTGGCTGCG
CTGCCGGGTG TTGAAGTCTT CCCGAGCGCC GCCAACTTCA TCCTTGCGCG CGTACCCGAT
GCAGCGGGAA TGTTCGATCG CCTGCTAAAA CGGCGTGTTC TCATCAAAAA CGTCAGTAAA
ATGCACCCGT TGTTGGCCAA CTGTCTGCGC GTGACGGTCA GCAATCCCGA AGAAAACGCG
CAATTTATCG ATGCCTTTGT CGCATCGATG CAGGAAGCCC CATGA
 
Protein sequence
MNATAPAQAS LDDLLARIVR DDVRAMGAYH VPDATGMVKL DAMENPYLLP AMLRDALGKR 
LAEVALNRYP VPTADALKAQ LKQVMHVPAG AEVLLGNGSD EIISLIAIAA AKPGATVLAP
VPGFVMYAMS AQLLGLNFVG VPLKADLTLD REAMLAAMAE HQPAVIYLAY PNNPTGNLFD
AADMDAIIRA ARGPVCQSLV VVDEAYQPFA QHSWMPRLRD FDHLLVMRTV SKLGLAGIRL
GYVAGHPKWI AELDKVRPPY NINVLTEATA QFMLEHVDVL DAQAATLRAE RTKLIDALAA
LPGVEVFPSA ANFILARVPD AAGMFDRLLK RRVLIKNVSK MHPLLANCLR VTVSNPEENA
QFIDAFVASM QEAP