Gene Rpic12D_2800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2800 
Symbol 
ID8020471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2969497 
End bp2970399 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content70% 
IMG OID644831587 
Productmodification methylase, HemK family 
Protein accessionYP_002982743 
Protein GI241664383 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2890] Methylase of polypeptide chain release factors 
TIGRFAM ID[TIGR00536] HemK family putative methylases
[TIGR03534] protein-(glutamine-N5) methyltransferase, release factor-specific 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.668211 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCGTCTT CCCCCGTCAT TCCGCCCGAA AACCTGGCTC GCGTGTCCGA CGCGCTGACG 
GCGCTGGCAC GCGCGGGCTT GCCTGCGCTT GAAGCGCGCA TGCTGGTTTC GCATGTGACG
GGCCTGTCGC GTGTGCAACT CATCACGCAA GACGCCTGCG CCATCGACGT GGCCGCGCGC
GCGCGTATCA GCGAACTCGC GGCGCGCCGC TTGGCCGGCG AGCCGATGGC GTATCTGCTC
GGCGAACGTG AATTCTTCGG CCGCACGTTC AAGGTCACGC CAGCCGTGCT GATCCCCCGC
CCCGATACCG AAGTGCTGGT GGAGCAGGCG CTGGACCGCC TCGAAGAACG CGATGCACCC
GCCGTGCTCG ACATGGGCAC GGGCAGCGGC ATCATCGCCA TCAGCATTGC GCTGGCGCGA
CGCGACGCGC GCGTGTGGGC CACCGACGCC TCCGCCGATG CGCTGGCCGT GGCGATCGAC
AACGCCAAGG CGCTCGGTGC CACCAACGTC CAGGCTGCGC TGGGCGACTG GTACGGCGCG
CTGGCCGGAA CCGATGCGCC ACCCGCCTTC GACCTGATCG CCAGCAACCC GCCCTACATC
GCCGCCACCG ACGCGCACCT CGACCAGGGC GACCTGCGCT TCGAGCCCGC CAGCGCCCTC
ACCGACCACG ATGACGGCCT GCGCCACCTG CGCAGCATCG TCGCCGGGGC GCCGGCGCGG
CTTGTCTCCG GGGGATGGCT GCTGGTCGAA CACGGCTACG ACCAAGGCGA ACCTGTGCGT
GCGCTGCTGG GCGGCGCGGG ATTCGCCAAC GTCTTCACCG CGCAGGACCT GGCCGGCCAC
GACCGGTGCA GCGGTGGGCA ATGGCCGGAT CAAAACGCCG GTGCGCGTTC CTCGCTAAAA
TAG
 
Protein sequence
MSSSPVIPPE NLARVSDALT ALARAGLPAL EARMLVSHVT GLSRVQLITQ DACAIDVAAR 
ARISELAARR LAGEPMAYLL GEREFFGRTF KVTPAVLIPR PDTEVLVEQA LDRLEERDAP
AVLDMGTGSG IIAISIALAR RDARVWATDA SADALAVAID NAKALGATNV QAALGDWYGA
LAGTDAPPAF DLIASNPPYI AATDAHLDQG DLRFEPASAL TDHDDGLRHL RSIVAGAPAR
LVSGGWLLVE HGYDQGEPVR ALLGGAGFAN VFTAQDLAGH DRCSGGQWPD QNAGARSSLK