Gene Rpic12D_2767 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2767 
Symbol 
ID8020438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2931995 
End bp2933011 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content69% 
IMG OID644831554 
Productquinone oxidoreductase, YhdH/YhfP family 
Protein accessionYP_002982710 
Protein GI241664350 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID[TIGR02823] putative quinone oxidoreductase, YhdH/YhfP family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.372024 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTTTC GCGCGCTGAT GCTTGAAAAG CAGGATGGCG GCCCGCTGGC CCACATCGTC 
GACCTCGATG ACGCGGCGTT GTCCACACCC GAAGCGCTTG CCAACGACGT CACCGCCGGT
GACGTGCTGA TCCGCGTGGA CTGGTCGACC ATCAATTACA AGGACGGCCT GGCCATCACC
GGCAAAGGCC CTGTCGTGCG CAAGTGGCCG ATGGTGGCCG GTATCGACGG CGCGGGCGTC
GTGCTCGAAT CCACGCACGC GGATTGGCGG ACCGGCGATG CGGTCGTGCT CAACGGCTGG
GGCGTCGGCG AGACGCATTG GGGGTGCCTC GCCCAGCAGG CGCGGCTTTC CGGCGATTGG
CTGGTGGCAT TGCCGGCGGG GCTCGATGCG CGGCAGGCCA TGGCGATCGG CACGGCGGGT
TACACGGCGA TGCTTTCGGT GCTGGCGTTG GAGCGTGCCG GCGTGAAACC GGGCGACGGC
GAGGTGCTGG TGACCGGCGC GTCGGGCGGC GTGGGCTCGA TCGCCATTGC GCTGCTCGGC
AAGCTGGGCT ATCGCGTGGT GGCGTCGACC GGGAAGACCA ATGAGGCCGA TTTCCTGCAG
GCGCTGGGCG CGACGGATGT CATTGACCGC GCCGAGCTTT CCGCCCCCGG CAAGCCGTTG
CAGAAAGAGC GCTGGGCGGC GGTGGTCGAT TCGGTGGGCT CGCACACGCT GGTCAACGCG
TGCGCACAGG TGCGCTATGG CGGCGTGGTC ACGGCTTGCG GGCTGGCGCA GGGCATGGAT
TTTCCGGCCA CCGTCGCGCC GTTCATCCTG CGTGGCGTGA CCCTGTGCGG GATCGACAGC
GTGATGGCGC CGCGTGCGCT GCGCCAGACC GCATGGCAGC GCCTCGCCGC CGATCTGCTG
CCGGATCGCC TGGCCGCCAT CACGCGCGAA GTGACGCTTT CCGAGGCCAT CGACGCTGCA
CACGACATCG TGGCGGGCAA GATGCGCGGG CGGGTCGTGG TCGACGTCAA CCGATAG
 
Protein sequence
MSFRALMLEK QDGGPLAHIV DLDDAALSTP EALANDVTAG DVLIRVDWST INYKDGLAIT 
GKGPVVRKWP MVAGIDGAGV VLESTHADWR TGDAVVLNGW GVGETHWGCL AQQARLSGDW
LVALPAGLDA RQAMAIGTAG YTAMLSVLAL ERAGVKPGDG EVLVTGASGG VGSIAIALLG
KLGYRVVAST GKTNEADFLQ ALGATDVIDR AELSAPGKPL QKERWAAVVD SVGSHTLVNA
CAQVRYGGVV TACGLAQGMD FPATVAPFIL RGVTLCGIDS VMAPRALRQT AWQRLAADLL
PDRLAAITRE VTLSEAIDAA HDIVAGKMRG RVVVDVNR