Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_2753 |
Symbol | |
ID | 8020424 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 2917725 |
End bp | 2918879 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644831540 |
Product | MltA domain protein |
Protein accession | YP_002982696 |
Protein GI | 241664336 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2821] Membrane-bound lytic murein transglycosylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0054451 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGCAG CAACCTTGGA CGCATTGACA CCAGCCCGCA ACGCTCTGCG CCGCCGATGG GCTGCCCGGT TTGGTTCCTT TGCCGCAGCC CTGGTCGCCG CAATGCTGGC AGCCTGCACG AGCGGGCCTC CGCCGCGCGT CGAAACGCCG CAAGCGCCCA CCGGCACGCT CGGCGGGCAT CTGGCCCCCG CCACCTGGGC CGATGTGTCC GGGTGGACCG CCGATGACCT CGCCTCTGCC TGGCCCGCGC TCCAATCCAA CTGCCAGGCG ATGAAGCGCC GCGCCGATTG GTCGCGCGTG TGCGCCGCTG GCCTGATGGT CGATGCCGGC GACCCGATCG CCATGCGAGT CTTCTTTGAA GACAACTTCA CGCCGTATCG CGTGGTGAAA GAGGACGGCA CCGACAGCGG CCTCATCACC GGTTACTACG AACCGCTGCT GCGCGGCTCG CGCACCCGCC ACGGGGTCTA TCAGACGCCG CTGTACCGCA TGCCCGCTGC ATGGCGCGGC AAGACGCTGC CGGCGCGCGC GCAATTGATC CGCAGTCCGG CGCTTCAGGG GCAAGAAATT GTCTGGGTGG ACGATCCGGT CGAAGCGGCG TTCCTGCAGA TTCAGGGTTC GGGCCAGGTC CAGTTGGAAG AGGGCGGCAT CATGCGCCTG GGCGTGGGTG GTACGAACAA CCAGCCGTTC CGCTCATTTG CGCGCTGGCT GCTCGACATG GGTGAGATCA CACCCGTACA GGCGACCATG CAGGGCATCA AGGCCTGGGC GCGCGCCAAT CCAAGTCGTG TGGAAGAGAT GCTCAACATC AATCCGCGCT ACGTATTCTT TGCCGAGACG CCCGGCAACA CGGGCGGCCC GATCGGCAAG CTGGGCGTGC CGCTCACGGA CGAACGCTCG ATCGCCGTTG ATCCGACCTA CATTCCGCTG GGCTCGCCGG TATTCCTGTC GACGACCAAG CCGCTGTCGA CCGATCCGAT CCAGAAGCTC GTGTTTGCGC AGGACGTGGG TTCGGCCATT CGCGGTGCCG TGCGAGCCGA CTATTACTTT GGCCATGGCG ATGCCGCCGG TGACTTGGCC GGGCGCATGA AGCAGGCGGG GCGCCTGTGG GTGCTCGTTC CGAAGGGCGG CAGCGTCGGC GTCGCCACCC GCTAG
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Protein sequence | MTAATLDALT PARNALRRRW AARFGSFAAA LVAAMLAACT SGPPPRVETP QAPTGTLGGH LAPATWADVS GWTADDLASA WPALQSNCQA MKRRADWSRV CAAGLMVDAG DPIAMRVFFE DNFTPYRVVK EDGTDSGLIT GYYEPLLRGS RTRHGVYQTP LYRMPAAWRG KTLPARAQLI RSPALQGQEI VWVDDPVEAA FLQIQGSGQV QLEEGGIMRL GVGGTNNQPF RSFARWLLDM GEITPVQATM QGIKAWARAN PSRVEEMLNI NPRYVFFAET PGNTGGPIGK LGVPLTDERS IAVDPTYIPL GSPVFLSTTK PLSTDPIQKL VFAQDVGSAI RGAVRADYYF GHGDAAGDLA GRMKQAGRLW VLVPKGGSVG VATR
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