Gene Rpic12D_2753 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2753 
Symbol 
ID8020424 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2917725 
End bp2918879 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content67% 
IMG OID644831540 
ProductMltA domain protein 
Protein accessionYP_002982696 
Protein GI241664336 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2821] Membrane-bound lytic murein transglycosylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0054451 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGCAG CAACCTTGGA CGCATTGACA CCAGCCCGCA ACGCTCTGCG CCGCCGATGG 
GCTGCCCGGT TTGGTTCCTT TGCCGCAGCC CTGGTCGCCG CAATGCTGGC AGCCTGCACG
AGCGGGCCTC CGCCGCGCGT CGAAACGCCG CAAGCGCCCA CCGGCACGCT CGGCGGGCAT
CTGGCCCCCG CCACCTGGGC CGATGTGTCC GGGTGGACCG CCGATGACCT CGCCTCTGCC
TGGCCCGCGC TCCAATCCAA CTGCCAGGCG ATGAAGCGCC GCGCCGATTG GTCGCGCGTG
TGCGCCGCTG GCCTGATGGT CGATGCCGGC GACCCGATCG CCATGCGAGT CTTCTTTGAA
GACAACTTCA CGCCGTATCG CGTGGTGAAA GAGGACGGCA CCGACAGCGG CCTCATCACC
GGTTACTACG AACCGCTGCT GCGCGGCTCG CGCACCCGCC ACGGGGTCTA TCAGACGCCG
CTGTACCGCA TGCCCGCTGC ATGGCGCGGC AAGACGCTGC CGGCGCGCGC GCAATTGATC
CGCAGTCCGG CGCTTCAGGG GCAAGAAATT GTCTGGGTGG ACGATCCGGT CGAAGCGGCG
TTCCTGCAGA TTCAGGGTTC GGGCCAGGTC CAGTTGGAAG AGGGCGGCAT CATGCGCCTG
GGCGTGGGTG GTACGAACAA CCAGCCGTTC CGCTCATTTG CGCGCTGGCT GCTCGACATG
GGTGAGATCA CACCCGTACA GGCGACCATG CAGGGCATCA AGGCCTGGGC GCGCGCCAAT
CCAAGTCGTG TGGAAGAGAT GCTCAACATC AATCCGCGCT ACGTATTCTT TGCCGAGACG
CCCGGCAACA CGGGCGGCCC GATCGGCAAG CTGGGCGTGC CGCTCACGGA CGAACGCTCG
ATCGCCGTTG ATCCGACCTA CATTCCGCTG GGCTCGCCGG TATTCCTGTC GACGACCAAG
CCGCTGTCGA CCGATCCGAT CCAGAAGCTC GTGTTTGCGC AGGACGTGGG TTCGGCCATT
CGCGGTGCCG TGCGAGCCGA CTATTACTTT GGCCATGGCG ATGCCGCCGG TGACTTGGCC
GGGCGCATGA AGCAGGCGGG GCGCCTGTGG GTGCTCGTTC CGAAGGGCGG CAGCGTCGGC
GTCGCCACCC GCTAG
 
Protein sequence
MTAATLDALT PARNALRRRW AARFGSFAAA LVAAMLAACT SGPPPRVETP QAPTGTLGGH 
LAPATWADVS GWTADDLASA WPALQSNCQA MKRRADWSRV CAAGLMVDAG DPIAMRVFFE
DNFTPYRVVK EDGTDSGLIT GYYEPLLRGS RTRHGVYQTP LYRMPAAWRG KTLPARAQLI
RSPALQGQEI VWVDDPVEAA FLQIQGSGQV QLEEGGIMRL GVGGTNNQPF RSFARWLLDM
GEITPVQATM QGIKAWARAN PSRVEEMLNI NPRYVFFAET PGNTGGPIGK LGVPLTDERS
IAVDPTYIPL GSPVFLSTTK PLSTDPIQKL VFAQDVGSAI RGAVRADYYF GHGDAAGDLA
GRMKQAGRLW VLVPKGGSVG VATR