| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2735 |
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| Symbol | |
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| ID | 8020400 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 2888627 |
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| End bp | 2889805 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644831516 |
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| Product | porin Gram-negative type |
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| Protein accession | YP_002982678 |
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| Protein GI | 241664318 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.396659 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAAT CGCTGCTGGC ATTGGCAGTA CTGGGCACGT TTGCGGGTGT TGCGCAGGCT
CAGTCGAGTG TGACGCTGTA TGGCGTGGTC GACGCCAACA TTGAGTACGT CAACCACGCG
CAAGCCGTAA CGGCTGCGGG GGTGGTCATA CCGGGCAGCA GCGGCTCGCG CCTGGCGATG
CAGGCCGGCG GCCTGTCTTC CAACCGCTGG GGCTTGCGCG GCGTCGAAGA CATCGGTGGC
GGTCTCAAGA GCCTGTTCGT GCTGGAATCG GGCTTCGCCA TGGACACCGG CACGCTGCAG
CAGGGCGGAC GCCTGTTCGG CCGGCAGGCG TTTGTCGGTT TGCAGGGCAA CTGGGGCAAG
ATCACGCTGG GTCGGCAATA CACCACGATC TTCGACATGA TGGCGAACTT CTCGCCGACC
GGTTACGCCA CGCAGTATGA GCCGGTGGTC GGCCAGCTCG GTCCGAACTT CCGCGAAGAC
AACATGATCA AGTACACCGG CGCATTCGGC CCGGTGACGG TGGAAGGCCA CTGGGCGTTC
GGCGAACGCG CAGGCAGCCA GACCGCCAAC TCGGCGTACG GCGTGGGCGC AAACTACTTT
GGCGGCCCGT TCGGCCTGGG TATCGCCTAT GACGAAGTGA AGGTGCTGAC GGCAGCCGAA
GCTCTGGGCG GCCCCGGCAA CGAGTACGCC AAGGACAAGC GCGCCGCCAT TGCCGCCAGC
TACACGATGG GCCCGGTCAA ACTCATGGGT GGCTATCGCT ACGGCAAGAC CGACACGGCC
TCATCTGGTG CCACGCTGGC TCTGCTGCCG CACCGCGACG ACTACTACTG GGCTGGCGTG
AACTACCAGG TGACGCCTGC GCTGGGCCTG ACGCTGGCGT ACTACTACGA CAAGATCAAG
GAAGCGACCA TCGGCGGGGC AACGGTCAAC CCGCGTAATC CGCAGCAGTG GCAGTTCATC
GCCGACTACA ACTTCTCCAA GCGCACCGAC GTGTATCTGA GCGCCGCGTA TGCACGCAAT
GCGTCGCTGA ACTGGGATTC GATCGGCTAT GTAACGAACC CGGCAACGGG CGCGCAAACG
TCGGTGGGCT ATCTGCCGGC GGCATCGCAG ACGTACTTCA TCACGCCAAA CTCGGATAAC
CAGGTCGGCG TGGCGATCGG CCTGCGTCAC AAGTTCTGA
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| Protein sequence | MKKSLLALAV LGTFAGVAQA QSSVTLYGVV DANIEYVNHA QAVTAAGVVI PGSSGSRLAM
QAGGLSSNRW GLRGVEDIGG GLKSLFVLES GFAMDTGTLQ QGGRLFGRQA FVGLQGNWGK
ITLGRQYTTI FDMMANFSPT GYATQYEPVV GQLGPNFRED NMIKYTGAFG PVTVEGHWAF
GERAGSQTAN SAYGVGANYF GGPFGLGIAY DEVKVLTAAE ALGGPGNEYA KDKRAAIAAS
YTMGPVKLMG GYRYGKTDTA SSGATLALLP HRDDYYWAGV NYQVTPALGL TLAYYYDKIK
EATIGGATVN PRNPQQWQFI ADYNFSKRTD VYLSAAYARN ASLNWDSIGY VTNPATGAQT
SVGYLPAASQ TYFITPNSDN QVGVAIGLRH KF
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