Gene Rpic12D_2729 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2729 
SymbolmurE 
ID8020394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2882116 
End bp2883660 
Gene Length1545 bp 
Protein Length514 aa 
Translation table11 
GC content68% 
IMG OID644831510 
ProductUDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 
Protein accessionYP_002982672 
Protein GI241664312 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0769] UDP-N-acetylmuramyl tripeptide synthase 
TIGRFAM ID[TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.975785 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCCA AGCCAACCTC CGATCGTCCG GCCATCGCGG CGCGCCTCGT GCCCGTGGTG 
GACTGGCTGC GCGTACAAGC GCCGGCGGGT GCCGACCTCA CGAGCGACAC GCGCAAGCTC
AAGACCGGCG ATGTGTTCGT GGCCTACGTG CTCGGCAATG TGCGTCAGCG TGGCGATGGC
CGTCCGCATA TTCCGCAGGC GATCGAGGCT GGCGCTTCCG CCGTGCTGGC CGAAGCGCAT
GGCTACACGA TGCCCGCAGA CGCGCCCGTG CGCATCCTTC CCGTGGACGG CCTGGCGGAA
CTGGCCGGGC CTCTGGCCGC GCAGTGGTAC GGCGTGCCGG GCCCGGAAGC GCTGCGTGTG
ATCGGTGTAA CGGGCACCAA CGGCAAGACG TCGTGTTCGC AATGGATCGC GCAGGCGCTG
ACCAAACACG GCGAGCGTTG CGCAGTGGTG GGTACGCTCG GCACGGGGTT TGTCGATGGA
CTGGCCGTGA CAGGCTTCAC CACGCCGGAC GCCATCCAGC TCCAGCGCAG CCTCGCCGAT
CTGCATCGCG CGGGCGCCCG CGCCATCGCC ATGGAAGTCT CGTCGCACGG TTTGGAGCAG
GGCCGCGTGG ATGGCACATG TTTCGACATC GCGGTGTTCA CCAACCTGAC GCAGGATCAC
CTCGACTACC ACGGCACGAT GGCCGAGTAC GAACTTGCCA AGGCGCGTCT GTTCGGCTGG
CCAGGCCTGC GTGCGGCGGT CATCAACCGC GACGATGCGG CCGGAGTGCG GTTGCTGCAG
AACGCCCGCG CCGACATCGA GACCATTGAA TACGGCATCG ACGGCGAAGC CGCTGCGCAG
CACGGCGCCA AGCAATGGCT GCGCGCCAGT AACGTGCGCG CGCACCGCAC GGGTACGACG
TTCGACGTGG ACGGCAGCTT CGGTCACGCG ACCGTCCATG CACCGACTCT CGGCCTGTTC
AACGTGTCGA ATCTGCTGGC TGTGCTTGGC GCACTGCTGG CGGCTGGCGT GCCGTGGCCG
GACGCCATTG CGCATCTGGA AAAGCTGCAG CCGGTCAGTG GCCGCATGGA GCGTTTCGGC
GGTGAAGATG GTCCGCTCGT GGTAGTGGAT TACGCTCACA CGCCCGACGC GCTGGAGCAG
ACGCTACGCG CGCTCGCACC GATTACCGAG GCGCGGGGCG GCAATCTGTG GGCTGTGTTC
GGCTGCGGCG GCGACCGCGA CCCCGGCAAG CGGCCGCAGA TGGGCGCCAT CGCCGAGCGC
CTGGCGCCGC ACGTGGTGCT CACCTCCGAC AACCCGCGCA GCGAAGATCC GCAGCACATT
CTCGACGAGA TCGCCGACGG CATGGAAAAC CCGCGCGCCG CCACCCAGAT CGAAGACCGC
GCCGCTGCCA TCCTGCATGC CGTGCGGCAC GCCGATGCGC TTGACGTGAT CGTCGTGGCT
GGCAAGGGAC ATGAATCGAC GCAGGAGATA GCCGGTCGCA AGCGGCCGTT CTCCGACCAG
GAACACGTGC GCCTGGCGCT CGCCGCCCGC GGGGTGATTG CATGA
 
Protein sequence
MTAKPTSDRP AIAARLVPVV DWLRVQAPAG ADLTSDTRKL KTGDVFVAYV LGNVRQRGDG 
RPHIPQAIEA GASAVLAEAH GYTMPADAPV RILPVDGLAE LAGPLAAQWY GVPGPEALRV
IGVTGTNGKT SCSQWIAQAL TKHGERCAVV GTLGTGFVDG LAVTGFTTPD AIQLQRSLAD
LHRAGARAIA MEVSSHGLEQ GRVDGTCFDI AVFTNLTQDH LDYHGTMAEY ELAKARLFGW
PGLRAAVINR DDAAGVRLLQ NARADIETIE YGIDGEAAAQ HGAKQWLRAS NVRAHRTGTT
FDVDGSFGHA TVHAPTLGLF NVSNLLAVLG ALLAAGVPWP DAIAHLEKLQ PVSGRMERFG
GEDGPLVVVD YAHTPDALEQ TLRALAPITE ARGGNLWAVF GCGGDRDPGK RPQMGAIAER
LAPHVVLTSD NPRSEDPQHI LDEIADGMEN PRAATQIEDR AAAILHAVRH ADALDVIVVA
GKGHESTQEI AGRKRPFSDQ EHVRLALAAR GVIA