Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_2729 |
Symbol | murE |
ID | 8020394 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 2882116 |
End bp | 2883660 |
Gene Length | 1545 bp |
Protein Length | 514 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644831510 |
Product | UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase |
Protein accession | YP_002982672 |
Protein GI | 241664312 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
TIGRFAM ID | [TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.975785 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGCCA AGCCAACCTC CGATCGTCCG GCCATCGCGG CGCGCCTCGT GCCCGTGGTG GACTGGCTGC GCGTACAAGC GCCGGCGGGT GCCGACCTCA CGAGCGACAC GCGCAAGCTC AAGACCGGCG ATGTGTTCGT GGCCTACGTG CTCGGCAATG TGCGTCAGCG TGGCGATGGC CGTCCGCATA TTCCGCAGGC GATCGAGGCT GGCGCTTCCG CCGTGCTGGC CGAAGCGCAT GGCTACACGA TGCCCGCAGA CGCGCCCGTG CGCATCCTTC CCGTGGACGG CCTGGCGGAA CTGGCCGGGC CTCTGGCCGC GCAGTGGTAC GGCGTGCCGG GCCCGGAAGC GCTGCGTGTG ATCGGTGTAA CGGGCACCAA CGGCAAGACG TCGTGTTCGC AATGGATCGC GCAGGCGCTG ACCAAACACG GCGAGCGTTG CGCAGTGGTG GGTACGCTCG GCACGGGGTT TGTCGATGGA CTGGCCGTGA CAGGCTTCAC CACGCCGGAC GCCATCCAGC TCCAGCGCAG CCTCGCCGAT CTGCATCGCG CGGGCGCCCG CGCCATCGCC ATGGAAGTCT CGTCGCACGG TTTGGAGCAG GGCCGCGTGG ATGGCACATG TTTCGACATC GCGGTGTTCA CCAACCTGAC GCAGGATCAC CTCGACTACC ACGGCACGAT GGCCGAGTAC GAACTTGCCA AGGCGCGTCT GTTCGGCTGG CCAGGCCTGC GTGCGGCGGT CATCAACCGC GACGATGCGG CCGGAGTGCG GTTGCTGCAG AACGCCCGCG CCGACATCGA GACCATTGAA TACGGCATCG ACGGCGAAGC CGCTGCGCAG CACGGCGCCA AGCAATGGCT GCGCGCCAGT AACGTGCGCG CGCACCGCAC GGGTACGACG TTCGACGTGG ACGGCAGCTT CGGTCACGCG ACCGTCCATG CACCGACTCT CGGCCTGTTC AACGTGTCGA ATCTGCTGGC TGTGCTTGGC GCACTGCTGG CGGCTGGCGT GCCGTGGCCG GACGCCATTG CGCATCTGGA AAAGCTGCAG CCGGTCAGTG GCCGCATGGA GCGTTTCGGC GGTGAAGATG GTCCGCTCGT GGTAGTGGAT TACGCTCACA CGCCCGACGC GCTGGAGCAG ACGCTACGCG CGCTCGCACC GATTACCGAG GCGCGGGGCG GCAATCTGTG GGCTGTGTTC GGCTGCGGCG GCGACCGCGA CCCCGGCAAG CGGCCGCAGA TGGGCGCCAT CGCCGAGCGC CTGGCGCCGC ACGTGGTGCT CACCTCCGAC AACCCGCGCA GCGAAGATCC GCAGCACATT CTCGACGAGA TCGCCGACGG CATGGAAAAC CCGCGCGCCG CCACCCAGAT CGAAGACCGC GCCGCTGCCA TCCTGCATGC CGTGCGGCAC GCCGATGCGC TTGACGTGAT CGTCGTGGCT GGCAAGGGAC ATGAATCGAC GCAGGAGATA GCCGGTCGCA AGCGGCCGTT CTCCGACCAG GAACACGTGC GCCTGGCGCT CGCCGCCCGC GGGGTGATTG CATGA
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Protein sequence | MTAKPTSDRP AIAARLVPVV DWLRVQAPAG ADLTSDTRKL KTGDVFVAYV LGNVRQRGDG RPHIPQAIEA GASAVLAEAH GYTMPADAPV RILPVDGLAE LAGPLAAQWY GVPGPEALRV IGVTGTNGKT SCSQWIAQAL TKHGERCAVV GTLGTGFVDG LAVTGFTTPD AIQLQRSLAD LHRAGARAIA MEVSSHGLEQ GRVDGTCFDI AVFTNLTQDH LDYHGTMAEY ELAKARLFGW PGLRAAVINR DDAAGVRLLQ NARADIETIE YGIDGEAAAQ HGAKQWLRAS NVRAHRTGTT FDVDGSFGHA TVHAPTLGLF NVSNLLAVLG ALLAAGVPWP DAIAHLEKLQ PVSGRMERFG GEDGPLVVVD YAHTPDALEQ TLRALAPITE ARGGNLWAVF GCGGDRDPGK RPQMGAIAER LAPHVVLTSD NPRSEDPQHI LDEIADGMEN PRAATQIEDR AAAILHAVRH ADALDVIVVA GKGHESTQEI AGRKRPFSDQ EHVRLALAAR GVIA
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