Gene Rpic12D_2723 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2723 
SymbolmurC 
ID8020388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2874052 
End bp2875503 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content66% 
IMG OID644831504 
ProductUDP-N-acetylmuramate--L-alanine ligase 
Protein accessionYP_002982666 
Protein GI241664306 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0773] UDP-N-acetylmuramate-alanine ligase 
TIGRFAM ID[TIGR01082] UDP-N-acetylmuramate--alanine ligase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCACA TCGTCAAGAA CATCCATTTT GTAGGCATCG GTGGCGCCGG CATGAGCGGC 
ATCGCGGAGG TGCTGCTGAA TCTGGGCTAC CGCGTGACGG GCTCGGATCT GGGCAGCAGC
GCGACCACGC AGCGTCTGGC AACGCTGGGC GCGACGATCA TGCAGGGCCA CGCGCCGGAA
CATGTGATCG GCGCCAATGC CGTGGTGGTC TCCACCGCCG TGCGCGGTGA CAACCCGGAA
GTGCTGGCCG CGCGCGCCAA GCGCATTCCC ATCGTGCCGC GTGCGGTGAT GCTGGCTGAG
CTGATGCGCC TGAAGCAGGG CATTGCCATC GCCGGTACGC ACGGCAAGAC GACGACCACC
AGTCTGGTCG CCTCCGTGCT GGCCGAGGGC GGCCTGGACC CGACGTTCGT GATCGGGGGG
CGCCTCAATT CCGCGGGCGC CAACGCGCGC CTGGGCACGG GTGATTTCAT CGTCGCCGAG
GCCGACGAAT CCGATGCGTC GTTCCTCAAC CTGTTCCCCG TGATCGAAGT CATCACCAAT
ATCGATGCCG ATCACATGGA CACCTACGGG CACGACTTCG CGCGCCTGAA GCAGGCGTTC
ATCGAGTTCA CGCAGCGGCT GCCGTTCTAC GGCATCGCCG TGCTGTGCGT GGACGACCCG
AACGTGCGCG AAATCCTGCC GTTCGTCTCC AAGCCGGTCG TGCGCTACGG GTTTGCCGAA
GACGCGCAGG TGCGTGCCGT CAATGCGCGC GCCGTCGATG GCCGCATGGA ATTCACCGTG
ATCCGCCAGC TCAACGGCCA TGCCGAGCCC CCGCTGTCGA TCACGCTCAA CCTGCCGGGC
CTGCACAACG TGCAGAACGC GCTGGCCGCC ATCGCCATCG CCACCGAACT GGAAGTGCCG
GACGAAGCCA TCGTCAAGGC GCTGGCCGAG TTCAACGGCG TGGGCCGCCG CTTCCAGCGC
TACGGCGAAG TGCCGACCGC TGACGGTAAG GGTCGCTTCA CGCTGATCGA CGACTACGGC
CATCACCCGG TCGAGATGGC GGCCACGCTG GCTGCGGCGC GCGGTGCGTT TCCCGGCCGC
CGCCTTGTGC TGTCGTTCCA GCCGCACCGT TTTACCCGCA CGCGCGATTG CTTCGAAGAT
TTCATCAAGG TGCTCGGGAC CGTCGATGCG CTGTTGCTGG CCGAGGTGTA TGCCGCTGGC
GAGCCGCCCA TCGTCGCCGC CGACGGCCGC GCCCTGACGC GTGCGCTGCG TGTGGCCAAC
AAGATCGAGC CGGTCTTCGT GGAACAGATT GAAGACATGC CGCAAGCGAT CATCGATGCG
GCGCAGGACG GCGACGTGGT GATCACCATG GGCGCCGGAT CGATCGGGCA GGTGCCCGGT
CAAGTTGTTG CGTTGCAGGC CCAGGCGCGC ACCGGCAATG TCGTGGATCT GAACGGAGGT
GCCGCAGCAT GA
 
Protein sequence
MKHIVKNIHF VGIGGAGMSG IAEVLLNLGY RVTGSDLGSS ATTQRLATLG ATIMQGHAPE 
HVIGANAVVV STAVRGDNPE VLAARAKRIP IVPRAVMLAE LMRLKQGIAI AGTHGKTTTT
SLVASVLAEG GLDPTFVIGG RLNSAGANAR LGTGDFIVAE ADESDASFLN LFPVIEVITN
IDADHMDTYG HDFARLKQAF IEFTQRLPFY GIAVLCVDDP NVREILPFVS KPVVRYGFAE
DAQVRAVNAR AVDGRMEFTV IRQLNGHAEP PLSITLNLPG LHNVQNALAA IAIATELEVP
DEAIVKALAE FNGVGRRFQR YGEVPTADGK GRFTLIDDYG HHPVEMAATL AAARGAFPGR
RLVLSFQPHR FTRTRDCFED FIKVLGTVDA LLLAEVYAAG EPPIVAADGR ALTRALRVAN
KIEPVFVEQI EDMPQAIIDA AQDGDVVITM GAGSIGQVPG QVVALQAQAR TGNVVDLNGG
AAA