Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_2723 |
Symbol | murC |
ID | 8020388 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 2874052 |
End bp | 2875503 |
Gene Length | 1452 bp |
Protein Length | 483 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644831504 |
Product | UDP-N-acetylmuramate--L-alanine ligase |
Protein accession | YP_002982666 |
Protein GI | 241664306 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
TIGRFAM ID | [TIGR01082] UDP-N-acetylmuramate--alanine ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCACA TCGTCAAGAA CATCCATTTT GTAGGCATCG GTGGCGCCGG CATGAGCGGC ATCGCGGAGG TGCTGCTGAA TCTGGGCTAC CGCGTGACGG GCTCGGATCT GGGCAGCAGC GCGACCACGC AGCGTCTGGC AACGCTGGGC GCGACGATCA TGCAGGGCCA CGCGCCGGAA CATGTGATCG GCGCCAATGC CGTGGTGGTC TCCACCGCCG TGCGCGGTGA CAACCCGGAA GTGCTGGCCG CGCGCGCCAA GCGCATTCCC ATCGTGCCGC GTGCGGTGAT GCTGGCTGAG CTGATGCGCC TGAAGCAGGG CATTGCCATC GCCGGTACGC ACGGCAAGAC GACGACCACC AGTCTGGTCG CCTCCGTGCT GGCCGAGGGC GGCCTGGACC CGACGTTCGT GATCGGGGGG CGCCTCAATT CCGCGGGCGC CAACGCGCGC CTGGGCACGG GTGATTTCAT CGTCGCCGAG GCCGACGAAT CCGATGCGTC GTTCCTCAAC CTGTTCCCCG TGATCGAAGT CATCACCAAT ATCGATGCCG ATCACATGGA CACCTACGGG CACGACTTCG CGCGCCTGAA GCAGGCGTTC ATCGAGTTCA CGCAGCGGCT GCCGTTCTAC GGCATCGCCG TGCTGTGCGT GGACGACCCG AACGTGCGCG AAATCCTGCC GTTCGTCTCC AAGCCGGTCG TGCGCTACGG GTTTGCCGAA GACGCGCAGG TGCGTGCCGT CAATGCGCGC GCCGTCGATG GCCGCATGGA ATTCACCGTG ATCCGCCAGC TCAACGGCCA TGCCGAGCCC CCGCTGTCGA TCACGCTCAA CCTGCCGGGC CTGCACAACG TGCAGAACGC GCTGGCCGCC ATCGCCATCG CCACCGAACT GGAAGTGCCG GACGAAGCCA TCGTCAAGGC GCTGGCCGAG TTCAACGGCG TGGGCCGCCG CTTCCAGCGC TACGGCGAAG TGCCGACCGC TGACGGTAAG GGTCGCTTCA CGCTGATCGA CGACTACGGC CATCACCCGG TCGAGATGGC GGCCACGCTG GCTGCGGCGC GCGGTGCGTT TCCCGGCCGC CGCCTTGTGC TGTCGTTCCA GCCGCACCGT TTTACCCGCA CGCGCGATTG CTTCGAAGAT TTCATCAAGG TGCTCGGGAC CGTCGATGCG CTGTTGCTGG CCGAGGTGTA TGCCGCTGGC GAGCCGCCCA TCGTCGCCGC CGACGGCCGC GCCCTGACGC GTGCGCTGCG TGTGGCCAAC AAGATCGAGC CGGTCTTCGT GGAACAGATT GAAGACATGC CGCAAGCGAT CATCGATGCG GCGCAGGACG GCGACGTGGT GATCACCATG GGCGCCGGAT CGATCGGGCA GGTGCCCGGT CAAGTTGTTG CGTTGCAGGC CCAGGCGCGC ACCGGCAATG TCGTGGATCT GAACGGAGGT GCCGCAGCAT GA
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Protein sequence | MKHIVKNIHF VGIGGAGMSG IAEVLLNLGY RVTGSDLGSS ATTQRLATLG ATIMQGHAPE HVIGANAVVV STAVRGDNPE VLAARAKRIP IVPRAVMLAE LMRLKQGIAI AGTHGKTTTT SLVASVLAEG GLDPTFVIGG RLNSAGANAR LGTGDFIVAE ADESDASFLN LFPVIEVITN IDADHMDTYG HDFARLKQAF IEFTQRLPFY GIAVLCVDDP NVREILPFVS KPVVRYGFAE DAQVRAVNAR AVDGRMEFTV IRQLNGHAEP PLSITLNLPG LHNVQNALAA IAIATELEVP DEAIVKALAE FNGVGRRFQR YGEVPTADGK GRFTLIDDYG HHPVEMAATL AAARGAFPGR RLVLSFQPHR FTRTRDCFED FIKVLGTVDA LLLAEVYAAG EPPIVAADGR ALTRALRVAN KIEPVFVEQI EDMPQAIIDA AQDGDVVITM GAGSIGQVPG QVVALQAQAR TGNVVDLNGG AAA
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