| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2670 |
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| Symbol | |
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| ID | 8020335 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 2815797 |
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| End bp | 2819717 |
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| Gene Length | 3921 bp |
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| Protein Length | 1306 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644831451 |
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| Product | putative type II DNA modification enzyme |
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| Protein accession | YP_002982613 |
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| Protein GI | 241664253 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.554607 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.580872 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCGCC GCTCAACACG TGAACTGGCC TTTTCTGCCC TAGCCATTGA AGGCGGGTTG
CTCGCGCCGG ATTTTCTCAA TAAGGTTGCT CACCTGGAGG CAGCGGAGCA GTCCGAGGCC
GCCTACGATA TCCCGCGCGG CCTGAAGCTG CGTGATGAAA TCGGTCGCTA TTGGAAAATC
GCCCAAAATT TGTGGCAGGA CTTCGATGCC AAGCGCAAGC GTTCAGACGT AGATACGCAT
GCCATCACGG TGCGGGAATT CCTGGAGCCG TTCTGCCGAC AGGTTCTCGG ATTTGCGGAC
CTGCGGTCGG TTGGCCAGCT TGTGCTCGAT GAACGCGTTT TCCCGATTGG CTTCAGTGCC
GGTGATGGTC GGGTTCCACT GGTTTTTGCT GCCTTTGACC AGGGGCTGGA TAAGCCGGGT
AAGCGTTTCG GTGATGGGCT TCGCAGCCGC TCCCCATTTC TCCTCGCACA AGAGTGTTTG
AATGCGAGCG AGCAAATGCT GTGGGGCATC GTTAGCAATG GGTTGAAATT GCGCATTCTC
CGCGAGAACG CCAGCCTGAC TCGCCCGGCC TACATTGAAT CTGACCTTGA GGCCATCTTT
GCTGAAGGTC TGTATCCAGA CTTCACGGCG CTGTGGTTGC TGGCTCACGG TACCCGCTTC
GGTAAGGTGG GGGCGGAACT GGCGGACAGC CCACTGGAGC GCTGGCGCAA TACTGCACAA
GAAGATGGTA TCCGCGCTCG CGACCGCTTG CGGGTGGGGG TCACCGAGGC ACTTCGAGCG
CTCGGTACGG GTTTTGTCGC CCATCCAGAG AATGGCCGGT TGCGTGAGCG CATACAGGCT
GGGCAACTCT CGACTCAGGC TTACTTCGAG CAACTGCTGC GTTTGGTTTA TCGTTTCATC
TTCCTCGCCA CTATCGAGGA CCGCGAACTC GTGTTCGCGC CGGATGCAAC GTCCGAGGCA
AAGGCTCGCT ACCAAGCGGG CTATAGCCTC CAGCGCCTGC GCCAACTTGC TGCCCGTCGT
CGCAGCTATG ACCGACATGC CGACCTTTGG CAGACGCTGA CCATCACGGT TGCCGGCCTG
AGCCAGGGTC AGGGCGCACT CGGTCTACCC GCACTGGGCG GACTTTTCGA GGCCGCCCAA
TGTCCTGACC TCGACGGCGC TGCACTGGAA AACCAAGCCC TGCTTTCTGC GTTGTTCAGC
TTGTGTTTTT TTCGCGAGGG GGCAGCGCTT TCGCGGGTGA ACTACCGTGA CATGGATTCT
GAAGAGCTCG GCAGCGTTTA CGAGAGCTTG CTGGAGTTGG TGCCAGTGGT CACGTTGGGC
GGCGGAGCGC GGATATTCGG GTTCGTCGGT GATGACGAAG AGGGAAGCAC GAAGGGTAAC
GCCCGCAAGC TTACCGGTTC CTATTACACC CCAGACAGTC TGGTACAAGA ACTCATCAAA
AGTGCGCTCG AGCCCGTTAT CGCACAAACG CTGAAGGCGA ATCCGCAGGA GCCCGTAAAG
GCGCTCCTCG GTCTGTCGGT CTGTGACCCC GCTTGCGGCT CGGGTCATTT CCTCCTAGCC
GCCGCGCGTC GCATTGCCGA GGAGGTCGCG CAGCTAAATG CCGCCGACGG AAATCCCCTC
CCCGACGACT ACCGCCATGC CTTGCGTGAT GTGGTAGCCC ATTGCATTTA CGGTGTCGAC
AAGAATCCTA TGGCGGTCGA ATTGGCGCGG ACGGCGCTGT GGCTGGAGGC CTACACGCCT
GACCGCCCGC TGACTTTCCT CGACCATCAC CTGCGTTGTG GCGATGCGTT GCTCGGCATC
CTTGACTCGG CGATTCTGGA GAATGGCATT CCGGACAAGG CGTTCAACGC GCTTTCCGGC
GACGACAAGG AGGTGGTCAA GGCCATCAAG AAAGCCAATC GCGAAGCGCT TAAGGCCATT
GAAAAGGCGC GCCACAAGTC GCATCACATG TTGAGCCTTG GCCTAGAGGA TGAAGGTGAC
ATCGTCGCGC TTGAGGCGTT GCCTGACGAC ACTCTGTCCG CGCTGGAGGC TAAGCGCTCG
GCCTATCGTG ATGCCGAGGC ACGCGTGGCT AGTTCTCGGG CGCGCCTGGC TGCTGACCTT
TTTGTTGCAG CTTTTGTCCT GCCCAAGACC AAGGAGCACG AACCTATCGT GCCGACCAGT
CAGGACCTGT GGCTGGTGAT GAACGGTAGT GACCCGCGAC CTGGCGTGGG TGCGGTAGCC
ACGGATGCGG CGCGGGTAGC ACAAGCCTTC CACTGGTGGC AGGCCTTTCC GCAGGTCAAG
GCAAAGGGTG GATTCGACGT GTTGCTCGGC AATCCGCCGT GGGAACGCAT CAAGTTGCAG
GAAGAGGAAT ACTTTGCCAC CCGCAGCCCT CTCGTGGCAG AAGCCCCACA CAAAGCGGAG
CGGGGACGAC GAATTGGCCT GCTCGCAGAA GGGATGTTGC TACATACCCT CTACCCGGAA
GCGGAGGCTG CGCAGGGCTT AGTGCCGCCG AATCGAGCCG AGCAGCAGCT CTACGCAGAG
TTCCTCGCAG CGCGGCGTGG CGCCGAAGCC GTTAGCCTGT TCGCCCATGA CGCCGGGCGC
TATCCGCTGA CAGGCGTGGG AGACGTGAAC ACCTATGCGC TCTTTGCCGA AACGTTTTCT
CAGCTAATGG GGCAAGCGGG GCGGGCGGGC TTCATTGTGC CCACCGGCAT TGCGACGGAC
GATAGCACCA AGGCGTACTT TTCCTCGCTT ACACAAACAG GGCGGCTGGC GAGTTTGTAC
GATTTTGAGA ATCGTGATGC CATCTTCCCG GCGGTTCATC GCAGCTACAA GTTTTGCCTG
CTTACGTTGG GTCGGACGAA CGCGGCTGAG TTCGTTTGCT TTGCCGCACA AGTGTCGCAG
CTCGCCGATA GCCGGCGACT CTTCAGGCTC ACGTCCGAGG AATTTCGCCT TATCAATCCG
AATACACTGA CTTGCCCGGT TTTCCGCAGC GAGCGCGATG CGGAGTTAAC CAAGAAGATT
TACCGGGCTG CGCCGGTTCT CATTGAGGAG GAGCCCACAG AGCGGAATCC GTGGGGCATT
CGCTTTATGC GAATGCTGGA TATGGCCAAC GACAGTGACC TCTTTCACGA CGCCTCAGCG
CCTGACCGGT TGCCACTGTA TGAAGCCAAG ATGATTCATC AGTTTGACCA TCGCTGGGCC
ACCTATAGCG ACGATGGAGC GAGCCGGGAT GTGCTTACGG CGGAAAAGTC TCAGCCGGAC
TATTTCGTCA CGCCACGTTA CTGGGTGGAG GGGGTGGAGG TCGAACAGCG ACTTGAGGAT
AAGGGCTGGA GCCGAGGGTG GCTGATGGGG TGGCGGGATA TTTGCCGCGC AACCGACGAG
CGCACAGTGA TTGCCTCGGT GGTGCCAAAG GTGGCGACAG GCGATACGTT GCTCTTGATG
TTTCCGAACT CTAATCACGG ACCGAGGGTG GCGTGTCTGC TGGCCGACCA ATGCTCGTTA
GTGCATGACT ATGTCGCACG GCAAAAGGTT GGGGGCACTC ACCTCAAGTA TCACGTCAAA
AAGCAATTGC CGAATCTTCC GCCGAGTCAG TATTCGGATG AGGACATCGC CTACATTGTT
CCCCGTGTTC TCGAGTTGAC ATATACATCC CGAGACCTCG GCGCTTGGGC TCGAGACCTC
GGGTATGAGG GGGAGCCCTT GGGCTGGGAC CCTGAGCGTC GTGCCATGTT GCGGGCTGAG
CTCGATGCCT ACTATGCACG CCTCTACGGC CTAACTCGTG ACGAATTGCG CTACATCCTC
GACCCGGCCG ACGTGATGGG GGCGGACTAT CCATCTGAAA CTTTCCGGGT CCTGAAAAAT
AGCGAAATGC GTGAGTTCGG CGAGTATAGA ACTCGTCGAT TAGTGTTAGA AGCGTGGGAC
CAAATCGAGC GGCGGCAGTG A
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| Protein sequence | MARRSTRELA FSALAIEGGL LAPDFLNKVA HLEAAEQSEA AYDIPRGLKL RDEIGRYWKI
AQNLWQDFDA KRKRSDVDTH AITVREFLEP FCRQVLGFAD LRSVGQLVLD ERVFPIGFSA
GDGRVPLVFA AFDQGLDKPG KRFGDGLRSR SPFLLAQECL NASEQMLWGI VSNGLKLRIL
RENASLTRPA YIESDLEAIF AEGLYPDFTA LWLLAHGTRF GKVGAELADS PLERWRNTAQ
EDGIRARDRL RVGVTEALRA LGTGFVAHPE NGRLRERIQA GQLSTQAYFE QLLRLVYRFI
FLATIEDREL VFAPDATSEA KARYQAGYSL QRLRQLAARR RSYDRHADLW QTLTITVAGL
SQGQGALGLP ALGGLFEAAQ CPDLDGAALE NQALLSALFS LCFFREGAAL SRVNYRDMDS
EELGSVYESL LELVPVVTLG GGARIFGFVG DDEEGSTKGN ARKLTGSYYT PDSLVQELIK
SALEPVIAQT LKANPQEPVK ALLGLSVCDP ACGSGHFLLA AARRIAEEVA QLNAADGNPL
PDDYRHALRD VVAHCIYGVD KNPMAVELAR TALWLEAYTP DRPLTFLDHH LRCGDALLGI
LDSAILENGI PDKAFNALSG DDKEVVKAIK KANREALKAI EKARHKSHHM LSLGLEDEGD
IVALEALPDD TLSALEAKRS AYRDAEARVA SSRARLAADL FVAAFVLPKT KEHEPIVPTS
QDLWLVMNGS DPRPGVGAVA TDAARVAQAF HWWQAFPQVK AKGGFDVLLG NPPWERIKLQ
EEEYFATRSP LVAEAPHKAE RGRRIGLLAE GMLLHTLYPE AEAAQGLVPP NRAEQQLYAE
FLAARRGAEA VSLFAHDAGR YPLTGVGDVN TYALFAETFS QLMGQAGRAG FIVPTGIATD
DSTKAYFSSL TQTGRLASLY DFENRDAIFP AVHRSYKFCL LTLGRTNAAE FVCFAAQVSQ
LADSRRLFRL TSEEFRLINP NTLTCPVFRS ERDAELTKKI YRAAPVLIEE EPTERNPWGI
RFMRMLDMAN DSDLFHDASA PDRLPLYEAK MIHQFDHRWA TYSDDGASRD VLTAEKSQPD
YFVTPRYWVE GVEVEQRLED KGWSRGWLMG WRDICRATDE RTVIASVVPK VATGDTLLLM
FPNSNHGPRV ACLLADQCSL VHDYVARQKV GGTHLKYHVK KQLPNLPPSQ YSDEDIAYIV
PRVLELTYTS RDLGAWARDL GYEGEPLGWD PERRAMLRAE LDAYYARLYG LTRDELRYIL
DPADVMGADY PSETFRVLKN SEMREFGEYR TRRLVLEAWD QIERRQ
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