Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_2637 |
Symbol | |
ID | 8020301 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 2776488 |
End bp | 2779472 |
Gene Length | 2985 bp |
Protein Length | 994 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644831417 |
Product | ribonucleotide-diphosphate reductase subunit alpha |
Protein accession | YP_002982580 |
Protein GI | 241664220 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
TIGRFAM ID | [TIGR02506] ribonucleoside-diphosphate reductase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.261091 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGACGG CCCAATCCGA AATCCACTCC GGCACCGCCA ATCCTTCGCA ATTTGCGCAA AGCGCTGGCG GCACGGCCGT GGCCCCCGGC ACCGCTTCCG GCGTCAATCT TGCCGACTAC AAGATCATTC GCCGCAACGG CGCCGTGGTG AGCTTCGAGC CTTCGAAGAT CGCCGTGGCC ATGACCAAGG CTTTCCTCGC CGTGAATGGC GGGCAGGGTG CTGCTTCCGC GCGTGTGCGC GAGCTGGTCG ACCAACAAAC GCAGAACGTC GTGCGCGCAC TGCTGCGCAG CCGCCCGAAC GGCGGCACGT TCCATATCGA AGACGTGCAG GATCAGGTGG AACTGGCCCT GATGCGCTCG GGCGAGCACG ACGTGGCCCG CGCCTACGTG CTGTACCGCG AGCGCCGCGC CCAGGAGCGC GCGCAAGCCG GTGAAACCCA GCAGCAACCG GCCTTCATCG GCCTGAACGT GACCGACGGC GGCATCAGCC GCCCGCTGGA CATGGTGGCG CTGCGCAACG TGATCGTCTC GGCCTGCGAA GGCCTGGGCG ACGCGGTGGA CCCGGAGCCG ATCCTCAAGG AAACGGTCAA GAACCTGTAT GAAGGCGTGC CGATGACGCA GGTGTACGAC TCGGCCATCC TGGCCTCGCG TACCCTGATC GAAAAGGACC CGGCGTACAG CCAGGTCACG GCGCGCATCC TGCTGCACAC GATCCGCCGC GAAATCCTCG GCGAAGAAGT CACGCAAGCC GAAATGAGCA CGCGCTACGT CGACTACTTC CCGCAGTTCA TCAAGCGCGG CATCAACGCC GAGCTGCTGG ACGACAAGCT GGCCCAGTTC GACCTGGCCC GCCTGGGCGC GGCGCTGGAC GCCTCGCGCG ACTTCCAGTT CAACTACCTC GGCCTGCAGA CGCTGTACGA CCGCTACTTC CTGCACATCA ACGAAACCCG CATCGAGATG CCGCAGGCAT TCTTCATGCG TGTGGCGATG GGCCTGGCGC TGAACGAAAT CGACCGCGAA GCCCGCGCCA TCGAGTTCTA CCAGCTGCTG TCGTCGTTCG ACTTCATGTC GAGCACGCCG ACGCTGTTCA ACTCGGGCAC GCGCCGCTCG CAACTGTCGT CGTGCTACCT GACCACCGTG TCGGACGATC TGGACGGCAT TTACGAAGCG CTGAAGGAAA ACGCGTTGCT GTCGAAGTTT GCCGGCGGCC TGGGCAACGA CTGGACCAAC GTGCGCGCAC TTGGCTCGCA CATCAAGGGT ACGAACGGCA AGAGCCAAGG CGTGGTGCCG TTCCTGAAGG TGGTCAACGA CACGGCCGTG GCCGTGAACC AGGGCGGCAA GCGCAAGGGC GCCGTCTGCG CGTACCTGGA AACGTGGCAC CTGGACATCG AAGAATTCCT GGAGCTGCGC AAGAACACGG GCGACGACCG CCGTCGCACG CACGACATGA ACACGGCCAA CTGGATTCCG GACCTGTTCA TGAAGCGCGT GATGGAAGGT GGCGAGTGGA CGCTGTTCTC GCCGTCCACC TGCCCGGACC TGCACGACAA GGTCGGCAAG GCATTCGAAC AGGCCTACCT GGCCTACGAA GACAAGGTCG CGCGCGGCGA GATCAAGCTC TTCAAGAAGA TGCCGGCGCT GCAACTGTGG CGCAAGATGC TGGGCATGCT GTTCGAAACC GGCCACCCGT GGATCACGTT CAAGGATCCG TGCAACATCC GCAGCCCGCA GCAGCACGTG GGCGTGGTGC ACAGCTCCAA CCTGTGCACG GAAATCACGC TGAACACCAA CGACAGCGAA ATCGCCGTGT GCAACCTGGG TTCGGTCAAC CTGGTTGCCC ACCTGGTCAA GCAGGCCGAC GGCAGCGTGG TGCTCGATCA CGAGAAACTG AAGAAGACCG TGCGCACGGC CATGCGCATG CTCGACAACG TCATCGACAT CAACTACTAC GCCGTCAAGA AGGCGCGTGA TTCGAACCTG CGCCACCGTC CGGTCGGCAT GGGCATCATG GGCTTCCAGG ACGCGCTGCA CGTACTGCGC GTGCCGTACG CCAGCGAGGC AGCGGTGCAG TTTGCCGACA CCTCGATGGA AGCCGTGTGC TACTACGCCT ACTGGGCGTC GACCGAGCTT GCTGAAGAGC GCGGCCGCTA CAGCAGCTAC AAGGGCTCGC TGTGGGATCG CGGCATCCTG CCGCAAGACT CGCTCAAGCT GCTGGCCGAA GAGCGCGGCG GCTACCTGGA AGCCGACATG TCGTCGACGA TGGACTGGGA CAGCCTGCGC GGCCGCATCA AGCAGTACGG CATGCGCAAC TCGAACTGCG TGGCGATCGC CCCGACGGCA ACGATCTCCA ACATCATCGG CGTGTCGGCC TGTATCGAGC CGACGTACCA GAACCTGTAC GTCAAGTCGA ACCTGTCGGG CGAATTTACG GTGGTCAACG ACTACCTGGT GCGCGACCTG AAGGCACGCG GCCTGTGGGA CGAAGTGATG GTCGCCGACC TGAAGTACTT CGACGGCTCG CTGGCCCGCA TCGACCGCAT CCCGCAAGAC CTGCGCGACC TGTACGCCAC GGCCTTCGAA GTGGAACCGC AATGGCTGGT GGAAGCGGCA TCGCGTCGCC AGAAGTGGAT CGATCAGGCC CAGTCGCTGA ACATCTACAT GGCCGGCGCA TCGGGCAAGA AGCTGGACGA CACGTACAAG CTGGCGTGGT TGCGTGGCCT GAAGACCACG TATTACCTGC GCACGATCGG CGCCACGCAC GTCGAGAAGT CGACCGTGTC GCGCGGCACG CTGAATGCGG TGTCGTCGGG TAGCGATGTG GGTGGTGTGT CGGCTGCAGG TGCGTCCGGC GTGACTTCAG CCGCGCCGAC CAGCGCACTG GACGCCGCTG CTGCCACCGC CCAGGCCATG CCGGAAGCCG AAGGCGCCGT GTGCACGATG CGCCCGGGCG ACCCCGGTTT CGAGGAATGC GAAGCCTGCC AATAA
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Protein sequence | MQTAQSEIHS GTANPSQFAQ SAGGTAVAPG TASGVNLADY KIIRRNGAVV SFEPSKIAVA MTKAFLAVNG GQGAASARVR ELVDQQTQNV VRALLRSRPN GGTFHIEDVQ DQVELALMRS GEHDVARAYV LYRERRAQER AQAGETQQQP AFIGLNVTDG GISRPLDMVA LRNVIVSACE GLGDAVDPEP ILKETVKNLY EGVPMTQVYD SAILASRTLI EKDPAYSQVT ARILLHTIRR EILGEEVTQA EMSTRYVDYF PQFIKRGINA ELLDDKLAQF DLARLGAALD ASRDFQFNYL GLQTLYDRYF LHINETRIEM PQAFFMRVAM GLALNEIDRE ARAIEFYQLL SSFDFMSSTP TLFNSGTRRS QLSSCYLTTV SDDLDGIYEA LKENALLSKF AGGLGNDWTN VRALGSHIKG TNGKSQGVVP FLKVVNDTAV AVNQGGKRKG AVCAYLETWH LDIEEFLELR KNTGDDRRRT HDMNTANWIP DLFMKRVMEG GEWTLFSPST CPDLHDKVGK AFEQAYLAYE DKVARGEIKL FKKMPALQLW RKMLGMLFET GHPWITFKDP CNIRSPQQHV GVVHSSNLCT EITLNTNDSE IAVCNLGSVN LVAHLVKQAD GSVVLDHEKL KKTVRTAMRM LDNVIDINYY AVKKARDSNL RHRPVGMGIM GFQDALHVLR VPYASEAAVQ FADTSMEAVC YYAYWASTEL AEERGRYSSY KGSLWDRGIL PQDSLKLLAE ERGGYLEADM SSTMDWDSLR GRIKQYGMRN SNCVAIAPTA TISNIIGVSA CIEPTYQNLY VKSNLSGEFT VVNDYLVRDL KARGLWDEVM VADLKYFDGS LARIDRIPQD LRDLYATAFE VEPQWLVEAA SRRQKWIDQA QSLNIYMAGA SGKKLDDTYK LAWLRGLKTT YYLRTIGATH VEKSTVSRGT LNAVSSGSDV GGVSAAGASG VTSAAPTSAL DAAAATAQAM PEAEGAVCTM RPGDPGFEEC EACQ
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