| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2616 |
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| Symbol | |
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| ID | 8020280 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 2754432 |
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| End bp | 2755817 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644831396 |
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| Product | UDP-N-acetylmuramate |
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| Protein accession | YP_002982559 |
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| Protein GI | 241664199 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
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| TIGRFAM ID | [TIGR01081] UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.695937 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATATCC ACATCCTTGG AATCTGCGGC ACCTTCATGG GCGGCATTGC CCTGATCGCC
CGTCAGGCTG GCCACCGCGT TACCGGCTGC GACGCGAACG TCTACCCTCC GATGAGCACC
CAGCTCGAAG CGCAAGGCAT CGAGCTGATC GAAGGCTTTG ACCCCGAACA GCTGTCCATC
GGTGCCGATC TCTATGTGAT CGGCAACGTG ATCTCCCGTG GCAACCCTCT GATGGAAGCC
ATCCTGGATC GCAATTTGCC CTACATCTCC GGTCCTCAAT GGCTCGGGGA CAATGTACTA
CGCCAGAAGT GGGTGCTTGC CGTAGCAGGT ACGCACGGCA AGACGACCAC GACATCGATG
CTCGCATGGG TCCTCCAGGA TGCCGGCTAC AACCCGGGCT TCCTGGTGGG CGGCGTGCCA
CGTAACTTCG GGCTGTCGGC GCGCCTGACG GAATCCAACT TCTTCGTGAT TGAAGCGGAC
GAGTACGACA CGGCCTTCTT CGACAAGCGC AGCAAGTTCG TTCATTACCG CCCCCGTACA
GCCATATTGA ACAACCTCGA ATTCGATCAC GCCGACATCT TTCCCGATCT TGCCGCGATC
GAAACCCAAT TTCATCATCT AGTGCGCACC GTGCCCGGTC AGGGCCGCCT CCTGGTCAAT
GGTCGGGAAG ATAGCCTGAA GCGGGTACTT GAGCGCGGAT GCTGGTCCGA AGTCGAGCAG
TTCGGCGCAG AAGGTGGCTC CGGCTGGAAA ATTGCAAACC TCAGTGATGA CGATAGCTTC
GACGTGGTGT TCAACGGACA ACCGCTAGGC CGTGTCCGCT GGGCACTTCA AGGGGACCAC
AATCGTATGA ATGCGGTGGC GGCCATCGCC GCCGCACGCC ATGTCGGTGT TCCACCTGCC
CAAGCTATTG AAAGCCTGGC CCGTTTCGAA AATGTGAAAC GGCGCATGGA AGTGCGCGGC
ACCGTGAATG ACGTGACTGT CTACGACGAT TTTGCCCATC ACCCGACGGC GATTCGCACG
ACCATCGAAG GCTTGCGCCG CCGCGTTGGC GAGGGGCGCA TTCTGGCTGT GCTGGAGCCG
CGTTCAAACA CCATGAAACT GGGTGTGATG AAACAGACGC TTCCGGACAG CCTCTCCGGA
GCGGACCAAA TCTTTGCTTA CGGCGCCGCC AATGGGCGCG ACGCGATCGG GTGGGATCTG
GCGGGCGCGT TGGCCCCTCT GGGCCAGCGC GCGAAAGCGT TCTCTGACTT GACTGCGCTA
GTTGACGCCG TGACGGCTGC CGCCCGCCCG GGCGACCATG TGCTTGTCAT GAGCAATGGC
GGCTTCGGAG GCGTACATCA GAAGCTGCTG GACGCCTTGG CCGAACGCGC CGAGACAGCG
AACTGA
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| Protein sequence | MHIHILGICG TFMGGIALIA RQAGHRVTGC DANVYPPMST QLEAQGIELI EGFDPEQLSI
GADLYVIGNV ISRGNPLMEA ILDRNLPYIS GPQWLGDNVL RQKWVLAVAG THGKTTTTSM
LAWVLQDAGY NPGFLVGGVP RNFGLSARLT ESNFFVIEAD EYDTAFFDKR SKFVHYRPRT
AILNNLEFDH ADIFPDLAAI ETQFHHLVRT VPGQGRLLVN GREDSLKRVL ERGCWSEVEQ
FGAEGGSGWK IANLSDDDSF DVVFNGQPLG RVRWALQGDH NRMNAVAAIA AARHVGVPPA
QAIESLARFE NVKRRMEVRG TVNDVTVYDD FAHHPTAIRT TIEGLRRRVG EGRILAVLEP
RSNTMKLGVM KQTLPDSLSG ADQIFAYGAA NGRDAIGWDL AGALAPLGQR AKAFSDLTAL
VDAVTAAARP GDHVLVMSNG GFGGVHQKLL DALAERAETA N
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