Gene Rpic12D_2606 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2606 
Symbol 
ID8020270 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2745592 
End bp2746092 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content67% 
IMG OID644831386 
ProductCinA domain protein 
Protein accessionYP_002982549 
Protein GI241664189 
COG category[R] General function prediction only 
COG ID[COG1546] Uncharacterized protein (competence- and mitomycin-induced) 
TIGRFAM ID[TIGR00199] competence/damage-inducible protein CinA C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.590584 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.640743 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAAT CCCGCGCGCT GGCCCAACTG GCCGAACTGG TGGCTGACAC GTTGAACAAG 
CGCAGCCTGA TGATGGCGTC CGCCGAATCG TGCACAGGCG GCCTGGTGTC TGCCGCCATC
ACCGATGTAT CAGGCTCGTC CGCGTGGTTC GAGCGCGGCT TCGTCGTCTA CTCCAACGAA
GCGAAATCGC AGATGTTGGG CGTGCCGGCA GCGCTGATCC GCGAACATGG CGCCGTGAGC
GAGCCGGTGG CGCATGCCAT GGCCGAGGGC GCCGTGCTCA ACAGCCGCGC GCAGGTTGCG
GTGGCGATTA CCGGCGTCGC GGGCCCGACC GGCGGGACGC CCGACAAGCC CGTCGGCATG
GTGTGCTTTG GTTGGAGCAA CCGGCTGCAA ACGCGCGTGG AAACGCGCCA CTTCAAGGGC
GATCGCAAGC AAGTTCGCCT GCAGGCTGCC GAGCACGCGC TGCGCGGCCT GCTCGACTTC
CTCGACTCGG CGGAATGCTG A
 
Protein sequence
MAESRALAQL AELVADTLNK RSLMMASAES CTGGLVSAAI TDVSGSSAWF ERGFVVYSNE 
AKSQMLGVPA ALIREHGAVS EPVAHAMAEG AVLNSRAQVA VAITGVAGPT GGTPDKPVGM
VCFGWSNRLQ TRVETRHFKG DRKQVRLQAA EHALRGLLDF LDSAEC