Gene Rpic12D_2590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2590 
Symbol 
ID8020254 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2728232 
End bp2729158 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content67% 
IMG OID644831370 
Producttranscriptional regulator, LysR family 
Protein accessionYP_002982533 
Protein GI241664173 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCGGC GCCTCCCTCC CCTTAATGCA TTGCGCGTCT TTGAAGTCGC GGGCCGACAC 
CTGAGCTTCA GCCGGGCCGC AGACGAGCTT TGCGTAACGA ACGCCGCCGT CAGCCACCAG
ATCAAGCAGC TCGAAGACCA TCTGGGCAAG AAGCTCTTCG CACGCCGCAA CAACCAGCTC
ACGCTCACGG ACGCGGGCGA CAACTACCTG CCCCGCGTGC GGGACGCCCT GCGTGCGCTC
GAACAAGCCA CCGACCTGTT GATGGACACC GCCGATGCGC CCCTGCGCGT GGCTGTGCCG
CCAACCTTTG GCGCCAAGTG GCTGGTGCCG CGCCTGTATC GCTTCTTCAA CCAGCACCCC
CACGTACGCG TGGAGGTATC GACCGCCGAT GTGCAGGACC ACGGCCAGTT CGATCTGTGC
ATCGACGACC GCCAAGTCAA CGCGCCGAAC CTGCGCGTCG AGTGGTTCAC CTCCACCGAT
TTCTTTCCGG TATGCAACGC CACGCTGCAG GCCGCGATTC GGATGCCGCA GGACCTCGCC
GCACAGACGC TGCTACACGA GCGCGGCGGA CGGCACCTCG CGCACCATCC GACGTGGCGG
CAATGGCTGG ATGAAGTCGG CGTCGCGCAC ATCGACGCCA CGCGCGGCCC AGCGTTTTCC
GAGGCGCTGA TGGCCCTGCA GGCCGCCATT GACGGCCAGG GCGTGGCGCT CGGCCAGGGC
ATCCTCGTCG AATACGACAT CGCCGCCGGA CGCCTGATGC GGCCGCTGGC GACTGAAGCC
TCGCTGCGCC TGTCGTACTA CCTGATCCAC CCGCACCAGG CGGCCGAGCA CGCAGGCTTT
GCACCGTTCC GCCAATGGCT CGTCGATGAA GTGGCACGTA GCGGCGGGCG GCCGCGCAAC
CAGTCGGCGG CAGGCGAGGT GTTTTGA
 
Protein sequence
MPRRLPPLNA LRVFEVAGRH LSFSRAADEL CVTNAAVSHQ IKQLEDHLGK KLFARRNNQL 
TLTDAGDNYL PRVRDALRAL EQATDLLMDT ADAPLRVAVP PTFGAKWLVP RLYRFFNQHP
HVRVEVSTAD VQDHGQFDLC IDDRQVNAPN LRVEWFTSTD FFPVCNATLQ AAIRMPQDLA
AQTLLHERGG RHLAHHPTWR QWLDEVGVAH IDATRGPAFS EALMALQAAI DGQGVALGQG
ILVEYDIAAG RLMRPLATEA SLRLSYYLIH PHQAAEHAGF APFRQWLVDE VARSGGRPRN
QSAAGEVF