Gene Rpic12D_2586 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2586 
SymbolaraG 
ID8020250 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2723142 
End bp2724677 
Gene Length1536 bp 
Protein Length511 aa 
Translation table11 
GC content66% 
IMG OID644831366 
ProductL-arabinose transporter ATP-binding protein 
Protein accessionYP_002982529 
Protein GI241664169 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1129] ABC-type sugar transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGCGT TTCTTGAGTT TCGTGGCATC AGCAAGGTGT TTCCGGGTGT GCGGGCGCTG 
TCCGATGTGT CGTTCAGCAT CGAATGCGGT CGCGTGCACG GGTTGCTGGG CGAGAACGGC
GCGGGCAAGT CGACGCTGTT GAAGATCCTG GGCGGCGACT ACCAGCCCGA TGGCGGGCAG
ATCGTCGTCG AGGGAAAGCC GACGGCGTTC CCGACCACGC GGGCGGCGCT GGATGCCGGC
ATTGCCGTCA TCCACCAGGA GCTGCAGACG GTGCCCGAGC TGACGGTGAT GGACAACCTG
CTGCTGGGCC ACCTGCCGGC CAGCGGCGGG TTCATCCGTC AGCGCGAGGC GATGGCCTGG
ACGCGCGAGC AGCTTGGCCG CATCGGCGTC GACCTGGACC CGCGCGCCAA GCTGAAGCAC
CTGTCGATCG GCCAGCGCCA GATGGTCGAG ATCTGCAAGG CGATCCTGCG CGATGCGCGT
GTGATTGCCC TGGACGAGCC GACGAGTTCG CTGTCGATCC GCGAGACCGA CATCCTGTTC
CGCCTAGTGA AAGACCTGCG CGCGCAGGGG CGTGCGCTGA TCTACATCTC GCACCGGCTC
GATGAGATTT TCGAGCTGTG CGATGGCTGC ACGATCTTCC GCGACGGCCG CAAGGTGGCG
GATTTGCCGT CGATGGCCAA CGTCACGCGC GACGAACTGG TCGCGCAGAT GGTCGGCCGC
CAGATCGACG ACATCTTCGA TTACCGCGCA CGGCCGCTGG GCGACGTGCG CCTGCAGGTG
GATGGCCTGA TGGGCCCGAA GCTGGCCGAG CCGGCAAGCC TGTCCGTACG CCGTGGCGAG
ATCGTCGGCC TGTTCGGGCT GGTGGGCGCG GGGCGTTCGG AACTCGCGCG ATTGATTTAC
GGCGCTGATC GCAAGACGGG GGGCAGTCTT ACGCTTGACG GCGCGCCAAT CCGCATCCGC
GACGTTGCCG ATGCCATCCG CCAGGGCATC GTGCTGTGCC CGGAAGACCG CAAGGAAGAA
GGCATCATCG GCTGCCGCTC GGTGTCGGAA AACATCAACA TCAGCTGCCG GCGCAACCAG
CGTCGCTTCC GCCTGTTCGT CAACGACCGG CAGGAAGCCA AGACGGCCGA TCACTACATC
ACGCGCCTGC GCATCAAGAC ACCCAACCGC GAGCAGCCGA TCCGCCTGCT GTCGGGCGGC
AACCAGCAGA AGGCGATCCT GGCGCGTTGG CTGGCGGAAG ACGATATGCG CGTGCTCATC
ATCGACGAGC CGACGCGCGG AATCGACGTC GGCGCCAAGA ACGAGATCTA CCAGGTGCTG
TATGAGCTGG CCGAACGCGG CGTGGCCGTG CTGATGATTT CCAGCGAGCT GCCGGAAATC
CTCGGTGTGG CTGACCGCGT GCTGGTGATG AGCGAAGGCC GCATCGCCGG CGAATTGCCG
CGCGAACAGG CGAACGAGCA AGCCGTGCTC AAGCTTGCGC TGCGGCCTGA ATCTGCGCCG
CTGCCGTCCG CACCTTTGCC GCCGCTGGCG GCATGA
 
Protein sequence
MSAFLEFRGI SKVFPGVRAL SDVSFSIECG RVHGLLGENG AGKSTLLKIL GGDYQPDGGQ 
IVVEGKPTAF PTTRAALDAG IAVIHQELQT VPELTVMDNL LLGHLPASGG FIRQREAMAW
TREQLGRIGV DLDPRAKLKH LSIGQRQMVE ICKAILRDAR VIALDEPTSS LSIRETDILF
RLVKDLRAQG RALIYISHRL DEIFELCDGC TIFRDGRKVA DLPSMANVTR DELVAQMVGR
QIDDIFDYRA RPLGDVRLQV DGLMGPKLAE PASLSVRRGE IVGLFGLVGA GRSELARLIY
GADRKTGGSL TLDGAPIRIR DVADAIRQGI VLCPEDRKEE GIIGCRSVSE NINISCRRNQ
RRFRLFVNDR QEAKTADHYI TRLRIKTPNR EQPIRLLSGG NQQKAILARW LAEDDMRVLI
IDEPTRGIDV GAKNEIYQVL YELAERGVAV LMISSELPEI LGVADRVLVM SEGRIAGELP
REQANEQAVL KLALRPESAP LPSAPLPPLA A