Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_2582 |
Symbol | |
ID | 8020246 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 2719520 |
End bp | 2720329 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644831362 |
Product | short chain dehydrogenase |
Protein accession | YP_002982525 |
Protein GI | 241664165 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGCTT TTCCGACGTC TTTTCCGCCA CGCCTCGCGG GCAAGGTCGC GCTGGTAACC GGTGCCACGC AAGGCATTGG CGGCGCGATC GCCAAGCTGT TCGCCCAGCA CGGCGCGCGC GTGATCGTCA ACGCGCTGGT GCGTGACGCG CGCGCCGAAG CCTTTGCCGC CGAAATTGGC AGCAGCGCTG GCAACGGCGA CAACATCCTC CTTGTGCAAG CCGACGTACG CGATCGCGCG CAGATTGACG CGATGGTCGC TGCCGGCGTC GAGCGCTTTG GCGGCATCGA CGTGCTGGTC AACAACGCCG GCATCAACGT ATTTTCCGAT CCGCTCAAGT TGAGCGAGGA CGACTGGGCG CGCTGCCTTT CCGTCGATCT GGAAGGCGCG TGGCACTGCG CGCGCGCCGT GCTGCCGCAT ATGCTGGCGC GCGGGGCGGG CAGCATCGTG AACATTGCCT CGGTGCATGG GCACAAGATC ATTCCCGGCG CGTTTCCGTA TCCGGTGGCC AAGCATGGGC TGATCGGCCT CACGCGGGCG CTAGGCATCG AATATGCGGC GCGCGGAATC CGCGTCAATT CGATTTCCCC AGGATTGATC CTCACGCCGA TTGCCGAGGC CGGTTTTGCC GCCGCGCCTG ACCCCGAAGC CGAACGCCGC CGCCAGGCCG AGCTGCTGCC GTGCAAGCGC ATCGGCGAGC CCGAAGAGGT GGCCTACACC GCGCTGTTCC TCGCCTCCGA CGAGGCGCGC TTCATCAACG CGACCGACAT CCTCATCGAT GGCGGGCGCT CGCAGCTCTA TCACGAATGA
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Protein sequence | MTAFPTSFPP RLAGKVALVT GATQGIGGAI AKLFAQHGAR VIVNALVRDA RAEAFAAEIG SSAGNGDNIL LVQADVRDRA QIDAMVAAGV ERFGGIDVLV NNAGINVFSD PLKLSEDDWA RCLSVDLEGA WHCARAVLPH MLARGAGSIV NIASVHGHKI IPGAFPYPVA KHGLIGLTRA LGIEYAARGI RVNSISPGLI LTPIAEAGFA AAPDPEAERR RQAELLPCKR IGEPEEVAYT ALFLASDEAR FINATDILID GGRSQLYHE
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