| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2568 |
|---|
| Symbol | |
|---|
| ID | 8020232 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | - |
|---|
| Start bp | 2703179 |
|---|
| End bp | 2704597 |
|---|
| Gene Length | 1419 bp |
|---|
| Protein Length | 472 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644831348 |
|---|
| Product | putative RNA methylase |
|---|
| Protein accession | YP_002982511 |
|---|
| Protein GI | 241664151 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0116] Predicted N6-adenine-specific DNA methylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.509771 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAACTG CTTACTTCGC GCCATGCCCC CGTGGGCTGG AACAGGCGCT GGCCGATGAA
CTGGCCGAAA TCGCCATCCG CCCCGAGGTC GATGAGCTGG CCGCGTTCGA GGTGGGCCGC
ACCGTACCGG GCGGCGTGCA CTTCTTCGGC ACGCAGGGCG CGGCATATGC TGTCAACCTG
CACAGCCGCA TTGCCAGCCG CGTGCTGATG CGCCTGGGGT CGCGCGGGTA TCGCTCCGAG
GACGATATCT ACGCGCTGGC CGCAGCGCAG CGCTGGGAAG ACTATTTCAC GCCCGACGAG
ATGATCCGCG TGGATGTGAC CGCGCACAAA TCGCCGTTGC AGAGCCTGAA GTTTGTCGGC
CTGCGCGTGA AGGACGGGGT GTGTGACCGC TTCCGCCAGC GCATGGGCGC GCGCCCCAGC
GTGGATACCG TCTCGCCGGA CGTGCGCATC TACGCATACC TGACCGAGAC CGATTGCACG
ATCTATCTCG ATACCACCGG CGAGCCGCTC TTCAAGCGCG GCTGGCGCCA GGAAAAGGGC
GAGGCGCCGC TGAAGGAGAA CCTCGCCGCC GGCATCCTGC GCCTGACGGG CTGGACGGGT
GCCCACGGCA TGCCGTTCTA CGATCCGATG TGCGGCAGCG GCACGTTCCT CGTCGAAGCT
GCACAACGTG CACTGGGCAT TGCACCGGGC GGGCAACGCG CCTTCGCCTG CGAGTGGTTG
CAGGACCACG ATGCCAAATG CTTCAAGCGT CTGCGCGAAG CCGCTGCGGA TGCGGCCGCC
GCGTCCATGC GCCGTACGCC GCCATTGGTG GCCGGCGCGG ACATTTCCAC CGATATGCTG
GCCTATGCCG CCGCGAATTG GCAGCGCGCC GGTCTGCCCG GCGAGCCGGT GCTCAAGCAG
GTCGATGCAC GCTTCGGCAA GCCGCCGTTT GAGGTGGCCG GCGTGTTGTT GATGAACCCG
CCGTACGGTG AGCGTATCGC CGTGCGCGGT GCACACGGTT CACGCCGCCG CCGGTCGGAA
GGCGAGGGCG AGGAGGATGG CACCGTGTTC GAGCGTGCCA GCCGCGCCAT GGGTGCCCCG
AGCGACGATG GCCGCCGTCC GGTGCGCGAA CTGCGCCAGC CCGAGCCACC GCCCCCGGTC
GACCCGGAGG AAGAGGCCGC CGCCAACGAA TTTGCGCAGG CCTTTGCCGG CACGCTCAAG
CGTGAATTCG CCGGCTGGAA GGCATTCGTC TTCACTGGCG ATCTCTCGAT GCCGCGTCGG
ATGCGGCTCA AGGAATCGCA GCGTACGCCG CTGTACAACG GCAACATCGA GTGCCGCCTG
TTCCGCTTCG ACATGGTGAA GGGCGGCATG CGAGATCGAC CGGAGCGGCC CGAGCGGCCT
GCAAATGGCG ATGCCTCAAA CGACAACGCC GACGCGTAA
|
|---|
| Protein sequence | MATAYFAPCP RGLEQALADE LAEIAIRPEV DELAAFEVGR TVPGGVHFFG TQGAAYAVNL
HSRIASRVLM RLGSRGYRSE DDIYALAAAQ RWEDYFTPDE MIRVDVTAHK SPLQSLKFVG
LRVKDGVCDR FRQRMGARPS VDTVSPDVRI YAYLTETDCT IYLDTTGEPL FKRGWRQEKG
EAPLKENLAA GILRLTGWTG AHGMPFYDPM CGSGTFLVEA AQRALGIAPG GQRAFACEWL
QDHDAKCFKR LREAAADAAA ASMRRTPPLV AGADISTDML AYAAANWQRA GLPGEPVLKQ
VDARFGKPPF EVAGVLLMNP PYGERIAVRG AHGSRRRRSE GEGEEDGTVF ERASRAMGAP
SDDGRRPVRE LRQPEPPPPV DPEEEAAANE FAQAFAGTLK REFAGWKAFV FTGDLSMPRR
MRLKESQRTP LYNGNIECRL FRFDMVKGGM RDRPERPERP ANGDASNDNA DA
|
|---|
| |