| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2557 |
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| Symbol | mnmA |
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| ID | 8020221 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 2690983 |
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| End bp | 2692095 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644831337 |
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| Product | tRNA-specific 2-thiouridylase MnmA |
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| Protein accession | YP_002982500 |
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| Protein GI | 241664140 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
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| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.74343 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAGA AGCGCATCGT CGTTGGGATG TCCGGCGGGG TGGATTCGTC TGTCACGGCG
TGGCTACTCA AGCAGCAGGG CTATGACGTC GTCGGCTTGT TCATGAAGAA CTGGGAAGAC
GATGACGACA GCGAATACTG CTCGACCCGG CAGGACTGGA TCGACGTGGT GTCGGTGGCC
GACCTGATCG GCGTCGACGT CGAAGCCGTC AACTTTGCCG CCGAGTACAA AGACCGCGTG
TTTGCGGACT TCCTGCGCGA ATACTCCGCC GGCCGCACGC CCAATCCCGA CGTGCTCTGC
AACGCCGAGA TCAAGTTCAA GGCCTTCCTC GACCACGCGA TGGCGCTTGG CGCCGACACG
ATTGCGACCG GGCATTACGC TCGCGTGCGC GAGGTCGACG GCCGTTTCGA GCTGCTGAAG
GCGTTCGATC ACACGAAAGA CCAAAGCTAC TTCCTGCACC GCCTGAACCA GGCGCAGCTC
TCGCGCACGC TCTTCCCGCT GGGCGAGATG CCGAAGACGA AGGTGCGGGA AATCGCCGCC
GAGATCGGTC TGCCCAACGC CAAGAAGAAG GATTCCACGG GGATCTGTTT TATCGGCGAG
CGGCCGTTCC GCGATTTCCT GAATCGCTAC CTGCCGACCA AGCCCGGCCC GATCAAGACG
CCCGACGGCA AGACCATCGG CGAACACATC GGCCTGGCGT TCTACACGCT GGGACAGCGC
AAGGGCATCG GCATCGGCGG CAGTCGCGAC GGTAACGGCG ACGCCTGGTA CGTGGCGCGC
AAGGACATGG CGGCCAATAC GTTGTACGTC GTGCAGGGGC ACGACCACCC GTGGCTGCTG
GCGCATACGG TACACGCCGA TGATTTGAGT TGGGTGGCTG GCCAAGCTCC GGTCGAGGGC
ACCGACCTTG GGGCCAAGAC GCGTTATCGC CAGGCGGATG CGCCTTGCAC GGTCGCACGC
GCGGGCGATG GCGCGCTCAC GCTGGCCTTC CCTGAGGCGC AGTGGGCTGT CACGCCAGGC
CAGTCCGCCG TGCTGTACGA CGGCGAGGTC TGCCTGGGCG GCGGCATTAT TTCGGCAGCT
GAGCCGGCTG TCGTCGAAAA GGCGATCGCC TAA
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| Protein sequence | MSKKRIVVGM SGGVDSSVTA WLLKQQGYDV VGLFMKNWED DDDSEYCSTR QDWIDVVSVA
DLIGVDVEAV NFAAEYKDRV FADFLREYSA GRTPNPDVLC NAEIKFKAFL DHAMALGADT
IATGHYARVR EVDGRFELLK AFDHTKDQSY FLHRLNQAQL SRTLFPLGEM PKTKVREIAA
EIGLPNAKKK DSTGICFIGE RPFRDFLNRY LPTKPGPIKT PDGKTIGEHI GLAFYTLGQR
KGIGIGGSRD GNGDAWYVAR KDMAANTLYV VQGHDHPWLL AHTVHADDLS WVAGQAPVEG
TDLGAKTRYR QADAPCTVAR AGDGALTLAF PEAQWAVTPG QSAVLYDGEV CLGGGIISAA
EPAVVEKAIA
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