| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2550 |
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| Symbol | secF |
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| ID | 8020214 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 2683808 |
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| End bp | 2684779 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644831330 |
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| Product | preprotein translocase subunit SecF |
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| Protein accession | YP_002982493 |
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| Protein GI | 241664133 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.341971 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.338499 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGTTTT TCCGCATCCG CCGCGACATT CCGTTCATGA AGCACGCGTT GATTCTTAAC
GCGCTGTCGT TCCTGACGTT TATCGCCGCT GTCTTCTTCC TGTTCCACAA GGGGCTGCAC
CTGTCGGTGG AGTTCACCGG CGGTACGGTG ATGGAAGTCG CTTACACCCA GGCCGCCGAT
CTGCCGAAGA TCCGCGGCGA CGTTGAGAAG CTCGGCTATG CCGATGCGCA GGTGCAGAAC
TTCGGCACCT CGCGCGACGT GATGATCCGT CTGCCGCTCA AGACCGGCCC GGACGGCAAG
CCCATCGCCT CGGCCGTGCA AAGCCAGCAG GTGATGACAG CCCTGAACGC AGTGAACCCC
GACGCCAAGC TGCAGCGCGT TGAGTTCGTC GGCCCGCAAG TGGGCAAGGA GCTCGCCACC
GACGGCCTGC TGGCGCTGCT GTTCGTGGTG GTCGGCATCG TGATCTACCT GTCGATCCGC
TTCGAATGGA AGTTTGCCGT TGCGGGCGTG ATCGCCAACC TGCACGACGT CGTGATCATC
CTGGGCTTCT TCGCCTTCTT CCAGTGGGAG TTTTCGCTGT CGGTGCTGGC GGGGGTGCTG
GCCGTGCTGG GCTATTCGGT CAACGAATCC GTGGTGATTT TCGACCGGAT CCGCGAAGCG
TTCCGCAAGT ACCGCAAGAT GAACACGCAC GAGGTGATCG ATCACGCGAT TACCAGCACC
ATCTCGCGCA CGATCATCAC ACACGGCTCG ACCGAAATGA TGGTGGTGTC GATGCTGGTG
TTCGGCGGCC CGACGCTGCA CTACTTTGCC GTGGCCCTGA CGATCGGTAT TCTGTTCGGC
ATCTACTCGT CGGTGTTCGT GGCCGCTGCG CTGTGCATGT GGCTCGGCGT CAAGCGTGAA
GACCTGGTCA AGGCCGAGAA GAAGGTTGGT GGCCCGAAGG AAGACGATCC GAACTTCGGC
GCGCAGGTCT GA
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| Protein sequence | MEFFRIRRDI PFMKHALILN ALSFLTFIAA VFFLFHKGLH LSVEFTGGTV MEVAYTQAAD
LPKIRGDVEK LGYADAQVQN FGTSRDVMIR LPLKTGPDGK PIASAVQSQQ VMTALNAVNP
DAKLQRVEFV GPQVGKELAT DGLLALLFVV VGIVIYLSIR FEWKFAVAGV IANLHDVVII
LGFFAFFQWE FSLSVLAGVL AVLGYSVNES VVIFDRIREA FRKYRKMNTH EVIDHAITST
ISRTIITHGS TEMMVVSMLV FGGPTLHYFA VALTIGILFG IYSSVFVAAA LCMWLGVKRE
DLVKAEKKVG GPKEDDPNFG AQV
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