Gene Rpic12D_2548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2548 
SymbolyajC 
ID8020212 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2681400 
End bp2681732 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content61% 
IMG OID644831328 
Productpreprotein translocase subunit YajC 
Protein accessionYP_002982491 
Protein GI241664131 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1862] Preprotein translocase subunit YajC 
TIGRFAM ID[TIGR00739] preprotein translocase, YajC subunit 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0861289 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTCCTGA TTTCCGACGC TTACGCGCAA ACTGCACCGG CAGCTGGTGG TGCCGCGGGT 
GGCCTGATGA GCTTCCTGCC CATCATCCTG ATGTTCGTGG TGCTGTGGTT CATCATGATC
CGCCCGCAAA TGAAGCGCCA GAAAGAAACC AAGGCGATGC TCGAAGCCCT GGCCAAGGGC
GACGAAGTGG TCACCGCCGG CGGCATTCTC GGCAAGGTGA GCAAGGTGGC CGAGCAGTAC
GTCACCGTGG AAATCGCTGC CAACACCGAA ATCACTGTGC AGAAGAGCGC CGTGACGACC
GTGCTGCCCA AGGGCACGCT CAAGGCGCTG TAA
 
Protein sequence
MFLISDAYAQ TAPAAGGAAG GLMSFLPIIL MFVVLWFIMI RPQMKRQKET KAMLEALAKG 
DEVVTAGGIL GKVSKVAEQY VTVEIAANTE ITVQKSAVTT VLPKGTLKAL