Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_2523 |
Symbol | |
ID | 8020187 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 2649030 |
End bp | 2649935 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 644831304 |
Product | TniB family protein |
Protein accession | YP_002982467 |
Protein GI | 241664107 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.122196 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAGCA CGACAGCCGA GTACAGCCAT CTCAGCCCGA AGGCGCAGGA ACAGCTGACC CTACCAGACA AGGATCGGAT TCGCCTGATC CAGGCTGGCA CGTGGCTCCC ACTCGATCAT GCAAAGACGA CGCTTCAGAA GTTGGAGGAC TTGCTCGACT ACCCAAAGGT CACGCGGATG CCGAGCTATC TCATCGTAGG TCCCTCGTAC AGCGGAAAGA CTTCCATTCT TGAGCGTTTT CGCGATCAAC ACCTTCCCGA CTTGGATCCT GAGCAGGAGG TAACGCGGTG CCCGGTGGTG ATGGTCGATG CACCGCCTAA GCCGGACTTG TCCGACTTCT ACAGCCGGAT CATGGATAGT CTGATGGCGC CGTACAAGCC GACGGCTCCG GTCTATGAAA AGTACTCGCA GGTCAAACGT CTTTTTGGCG AGATGGATGT GCGCATCCTC ATCATCGATG AGATCCACCA TCTGATTGCC GGCGGCCTAA CCAAGCAACG CGAGTTTCGC AATGCCCTCA AAAGCCTGAG CAATGAAGCG AAGGTCAGCA TCGTTGCCTC AGGGATCGAA GAGGCGTACA ACGCGTTCAA CGCTGATCCG CAGATGTCGA GCCGATTCGT ACCGATTGAG ATGCCTAGTT GGACACCAGG CCGGCAATTG GGGACGTTGC TGAAGACCTT GGAGCACCGG ACACCGTTGC GCCAACCGTC AGGGCTCCAT CGTCCAGAGA TGATGCAGGC GATCTACGTG AGGAGCGAGT CCACCCTTGG TGACATCTTT GACCTCGTGA AGACGGCGGC GGTAGAGGCC ATTCGGTCCG GAAAGGAGGC GATCACCGAA CAGCAGCTCG CCGAGTTGGA CTGGGTCCCA CCCTCCAAGC GCAGGACGTA CAGACGGCAG CTATGA
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Protein sequence | MNSTTAEYSH LSPKAQEQLT LPDKDRIRLI QAGTWLPLDH AKTTLQKLED LLDYPKVTRM PSYLIVGPSY SGKTSILERF RDQHLPDLDP EQEVTRCPVV MVDAPPKPDL SDFYSRIMDS LMAPYKPTAP VYEKYSQVKR LFGEMDVRIL IIDEIHHLIA GGLTKQREFR NALKSLSNEA KVSIVASGIE EAYNAFNADP QMSSRFVPIE MPSWTPGRQL GTLLKTLEHR TPLRQPSGLH RPEMMQAIYV RSESTLGDIF DLVKTAAVEA IRSGKEAITE QQLAELDWVP PSKRRTYRRQ L
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