Gene Rpic12D_2523 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2523 
Symbol 
ID8020187 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2649030 
End bp2649935 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content57% 
IMG OID644831304 
ProductTniB family protein 
Protein accessionYP_002982467 
Protein GI241664107 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.122196 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAGCA CGACAGCCGA GTACAGCCAT CTCAGCCCGA AGGCGCAGGA ACAGCTGACC 
CTACCAGACA AGGATCGGAT TCGCCTGATC CAGGCTGGCA CGTGGCTCCC ACTCGATCAT
GCAAAGACGA CGCTTCAGAA GTTGGAGGAC TTGCTCGACT ACCCAAAGGT CACGCGGATG
CCGAGCTATC TCATCGTAGG TCCCTCGTAC AGCGGAAAGA CTTCCATTCT TGAGCGTTTT
CGCGATCAAC ACCTTCCCGA CTTGGATCCT GAGCAGGAGG TAACGCGGTG CCCGGTGGTG
ATGGTCGATG CACCGCCTAA GCCGGACTTG TCCGACTTCT ACAGCCGGAT CATGGATAGT
CTGATGGCGC CGTACAAGCC GACGGCTCCG GTCTATGAAA AGTACTCGCA GGTCAAACGT
CTTTTTGGCG AGATGGATGT GCGCATCCTC ATCATCGATG AGATCCACCA TCTGATTGCC
GGCGGCCTAA CCAAGCAACG CGAGTTTCGC AATGCCCTCA AAAGCCTGAG CAATGAAGCG
AAGGTCAGCA TCGTTGCCTC AGGGATCGAA GAGGCGTACA ACGCGTTCAA CGCTGATCCG
CAGATGTCGA GCCGATTCGT ACCGATTGAG ATGCCTAGTT GGACACCAGG CCGGCAATTG
GGGACGTTGC TGAAGACCTT GGAGCACCGG ACACCGTTGC GCCAACCGTC AGGGCTCCAT
CGTCCAGAGA TGATGCAGGC GATCTACGTG AGGAGCGAGT CCACCCTTGG TGACATCTTT
GACCTCGTGA AGACGGCGGC GGTAGAGGCC ATTCGGTCCG GAAAGGAGGC GATCACCGAA
CAGCAGCTCG CCGAGTTGGA CTGGGTCCCA CCCTCCAAGC GCAGGACGTA CAGACGGCAG
CTATGA
 
Protein sequence
MNSTTAEYSH LSPKAQEQLT LPDKDRIRLI QAGTWLPLDH AKTTLQKLED LLDYPKVTRM 
PSYLIVGPSY SGKTSILERF RDQHLPDLDP EQEVTRCPVV MVDAPPKPDL SDFYSRIMDS
LMAPYKPTAP VYEKYSQVKR LFGEMDVRIL IIDEIHHLIA GGLTKQREFR NALKSLSNEA
KVSIVASGIE EAYNAFNADP QMSSRFVPIE MPSWTPGRQL GTLLKTLEHR TPLRQPSGLH
RPEMMQAIYV RSESTLGDIF DLVKTAAVEA IRSGKEAITE QQLAELDWVP PSKRRTYRRQ
L