| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2506 |
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| Symbol | |
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| ID | 8020170 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 2631088 |
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| End bp | 2632131 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644831287 |
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| Product | twitching motility protein |
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| Protein accession | YP_002982450 |
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| Protein GI | 241664090 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.876718 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACATCG CGCAGCTTCT GGCGTTTTCC GCCAAGAACA AGGCGTCGGA CTTGCACCTG
TCGGCCGGAC TGCCGCCGAT GATCCGGATC CACGGCGACA TGCGCCGGAT CAACGTCCCA
CCGCTCACGC ACCAGGATGT GCACTCCATG GTGTACGACA TCATGAGCGA CGGGCAACGC
AAGGTCTACG AAGAAAACCT GGAAGTCGAC TTCTCGTTTG AGATCCCGGG GCTCTCGCGT
TTCCGGGTCA ACGCGTTCAA CCAGAACCGT GGCGCTTCGG CGGTGTTCCG GACGATTCCG
TCGAAGGTGC TCTCGCTGGA TGACCTGAAG GCGCCCGCCG TGTTCGCGGA CCTGGCGATG
AAGCCGCGCG GCCTGGTGCT CGTCACGGGC CCGACCGGCT CGGGCAAGTC GACCACGCTG
GCCGCGATGG TCAATCACCG CAACGAAAAC GACATGGGCC ACATCCTCAC GGTGGAGGAC
CCGATCGAAT TCGTGCACGA ATCGAAGAAG AGCCTGATCA ACCAGCGTGA ACTCGGCCCC
CATACCCATT CGTTCGCCAA TGCGCTGAAG TCGGCGCTGC GTGAAGATCC GGACGTGGTG
CTGGTCGGCG AATTGCGTGA CCTTGAAACC ATTCGCCTGG CGCTTACCGC CGCAGAAACC
GGCCACTTGG TGTTCGGCAC GCTGCACACC AGCTCGGCGG CCAAGACCAT CGACCGGGTC
GTCGACGTGT TCCCGTCGGA CGAAAAAGAG ATGGTCCGCA CCATGCTTTC CGAATCGCTG
GAGGCGGTGA TCTCGCAGAC GCTGCTCAAG ACGCGCGACG GTTCGGGCCG GATTGCGGCG
CACGAAATCA TGATTGCCAC GCCGGCCATC CGTCACTTGA TCCGCGAGAA CAAGATCTCG
CAGATGTACT CGATGATGCA GACCAGCAGC GGCATGGGCA TGCAGACGCT CGACCAGTGC
CTGTCGGAGC TGATCAAGCG CTCGGCGATC AACTACGCAG ACGCACGCGC CATCGCCAAG
AACCCGGACG CGTTCGCGAA CTGA
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| Protein sequence | MDIAQLLAFS AKNKASDLHL SAGLPPMIRI HGDMRRINVP PLTHQDVHSM VYDIMSDGQR
KVYEENLEVD FSFEIPGLSR FRVNAFNQNR GASAVFRTIP SKVLSLDDLK APAVFADLAM
KPRGLVLVTG PTGSGKSTTL AAMVNHRNEN DMGHILTVED PIEFVHESKK SLINQRELGP
HTHSFANALK SALREDPDVV LVGELRDLET IRLALTAAET GHLVFGTLHT SSAAKTIDRV
VDVFPSDEKE MVRTMLSESL EAVISQTLLK TRDGSGRIAA HEIMIATPAI RHLIRENKIS
QMYSMMQTSS GMGMQTLDQC LSELIKRSAI NYADARAIAK NPDAFAN
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