| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2477 |
|---|
| Symbol | |
|---|
| ID | 8020141 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | - |
|---|
| Start bp | 2594340 |
|---|
| End bp | 2595209 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644831258 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_002982421 |
|---|
| Protein GI | 241664061 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0948255 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCGC TCGAAACTGC CGTGCAGCAG CGCACCTCTG CCGATGCAGC GCCGCCCACC
AGCAAGCCTG TGCGCAAGCT GCGCGGCTAT CGTTTGCCGG GGGAAGGCAG CGCATTCGGG
CTCAGCGTGT TGTCGGTGAT TACGCTGCTC GTGCTCTGGT GGGCGGCCAC CACCTTCCAT
TGGGTGCCGC CGTTGTTCCT GCCCTCACCG CAGGCCGTGG GGCGCGCATT CATCGATGCC
TGGCATGGCG ATATTCAAGG CGGCCAGCCG CTGGCCGCAC ATCTTGGCTG GAGTGCGCTA
CGCGTGTTCG GCGCGTTTGC TCTGGCCGCC GTGACGGCCA TTCCGATCGG CCTCGCGATG
GGTGTCTCCC GCACCGCGCG CGGCTTGCTG GACCCGCCCA TCGAGTTCTA TCGCCCGCTG
CCGCCGCTGG CATACCTGCC GCTCGTGGTC ATCTGGCTGG GCATTGATGA GCGCGCGAAG
ATTGTCGTCA TCTATCTTGC CTGCTTCGCA CCGATTGCCA TGGCCGCGCG TGCCGGCGTG
CGCAGCGCCA CGCTTGAGCA GATCAACGCC GCGTATGCGC TGGGCGCGAG CTTCACGCAG
GTGGTGCGGC ATGTGATCCT GCCGGCGGCG CTGCCCGAGA TCCTGACCGG CTTGCGCATC
GCCATCGGCT TCGGCTGGAC CACGCTGGTG GCGGCGGAAA TGGTGGCGGC CACCGTGGGC
GTGGGGCAGA TGGTGCTCAA TGCGTCGAGC TTTCTGCGCA CCGACCTCGT GGTGATGGGC
ATCGTGCTGA TCGGCGCGAT TGCATGGGCG TTCGACTTGG CCATGCGCGC CATCGAAGCG
CGCGTGGTGC CCTGGAAGGG CCGCAGCTAG
|
|---|
| Protein sequence | MSALETAVQQ RTSADAAPPT SKPVRKLRGY RLPGEGSAFG LSVLSVITLL VLWWAATTFH
WVPPLFLPSP QAVGRAFIDA WHGDIQGGQP LAAHLGWSAL RVFGAFALAA VTAIPIGLAM
GVSRTARGLL DPPIEFYRPL PPLAYLPLVV IWLGIDERAK IVVIYLACFA PIAMAARAGV
RSATLEQINA AYALGASFTQ VVRHVILPAA LPEILTGLRI AIGFGWTTLV AAEMVAATVG
VGQMVLNASS FLRTDLVVMG IVLIGAIAWA FDLAMRAIEA RVVPWKGRS
|
|---|
| |