Gene Rpic12D_2456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2456 
Symbol 
ID8020120 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2572243 
End bp2573805 
Gene Length1563 bp 
Protein Length520 aa 
Translation table11 
GC content67% 
IMG OID644831237 
Productpoly(A) polymerase 
Protein accessionYP_002982400 
Protein GI241664040 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0617] tRNA nucleotidyltransferase/poly(A) polymerase 
TIGRFAM ID[TIGR01942] poly(A) polymerase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCAAGA AACTCATCAA TCGCCTGCTG GGCAAAACCT CCGCAGAGCC TCAGGCACCC 
GCTGAACCGG GGGCGCCCGC CGCCAGGAAG ACCCGCTCGC CCAAGGCACC GAGAACGGCC
AAGGCGCGCA CCAAGTCTGC CGGGGGCGTG CCGCGCCAGG CGCGCGTATG GAGCGTGGAC
GAGCACGGTA TCGACCCGAA GCTGCTCTCG CGCAACGCGG TCAAGGTCAC GTCCACGCTG
CAGGAAGCCG GCTATAGCGC CTTCATCGTG GGCGGCGCCG TGCGCGACTT GCTGCTCGGC
ATCAAACCGA AAGACTTCGA TGTAGCGACC AACGCCACGC CCGATCAGGT TCAGGCGCTG
TTCCGCCGCT CGCGCATCAT CGGACGCCGC TTCCAGATCG TGCACGTCAC GTTCTACGGC
GGACGCGATC AGGAAATCAT CGAAGTCTCG ACCTTCCGCG CGCTCGTCGA CGCGGTGGAC
GCCGAGCAGG TGCCCGCGGG CAAGCGCGTC AAGCGCACCG AGTTGGACCA CCACACGCAT
GCCGTCGACG CCAGCGGCCG CGTGCTGCGC GACAACGTCT GGGGCACCCA GGCCGAAGAC
GCCACCCGCC GCGACTTCAC CGTCAACGCG ATGTACTACA ACCCCGCCGA CGAAACCGTG
CATGACTACC ATCACGGCAT GGAAGACATG CGCGCGCGTA CGCTGCGCAT GATCGGCGAT
CCGCTCACCC GCTACCGCGA AGACCCGGTC CGTATGCTGC GCGTGGTGCG CTTCGCGGCC
AAGACCGGTT TCGACATCGA CCCCGACACG CGCGCGCCGA TCGCGGAGCT GGGCCCGCTG
ATCCACAACG TGCCGGCCGC ACGCCTGTTC GACGAGATGC TGAAGCTGCT GATGTCGGGC
CACGCCTGGG CATCGCTGCA GGAACTGCGC AAGGCGGGCC TGCACCGCGG CCTGCTGCCG
CTGCTGGACG TCGCACTGGA GCAGCCGATG GGCCAGCGCT TCGTGCAGCT TGCCCTCGAC
AACACCGACG ATCGCGTCAA GGCCGGCAAG CCGGTCTCGC CGGGCTTCCT GTTTGCCTCG
CTGCTGTGGC ATCACGTGGT CGAGCACTGG AACCGCCGCC GCGCCGCCGG CGAGCCGCTG
ATCCCCGCGC TGCACACCGC CATGGACGAA GTGCTCGACC GCCAGACCGA GCAACTCGCC
ATCCAGCGCC GCTTTACCTC CGACATGAAG GAAATCTGGA GCATGCAGCC GCGCTTTGAG
AAGCGCTCGG GCCGCATGCC GTATCGCTTG CTCGAATCGC CGCGCTTCCG CGCCGGTTAC
GACTTCCTCG TGTTGCGTTG TGCGTCGGGC GAATTGCCGC AAGAACTGGC CGACTGGTGG
ACCGATTTCC AGAGCGGCGA TGGCGAAGCC CGCGAAGCCC TCATGGCACA AGCCAAGCAC
GCACCGAGCC CCTCGGCAAA TACCGGTTCG GCCAGCCCGG GCAAGCGGCG TCGCCGCCGA
CGTGGTCCGG CAAAATCGGA TACAGTCGTT GACGTCAATC CGGGAAGTTC GGAGGAAACG
TGA
 
Protein sequence
MIKKLINRLL GKTSAEPQAP AEPGAPAARK TRSPKAPRTA KARTKSAGGV PRQARVWSVD 
EHGIDPKLLS RNAVKVTSTL QEAGYSAFIV GGAVRDLLLG IKPKDFDVAT NATPDQVQAL
FRRSRIIGRR FQIVHVTFYG GRDQEIIEVS TFRALVDAVD AEQVPAGKRV KRTELDHHTH
AVDASGRVLR DNVWGTQAED ATRRDFTVNA MYYNPADETV HDYHHGMEDM RARTLRMIGD
PLTRYREDPV RMLRVVRFAA KTGFDIDPDT RAPIAELGPL IHNVPAARLF DEMLKLLMSG
HAWASLQELR KAGLHRGLLP LLDVALEQPM GQRFVQLALD NTDDRVKAGK PVSPGFLFAS
LLWHHVVEHW NRRRAAGEPL IPALHTAMDE VLDRQTEQLA IQRRFTSDMK EIWSMQPRFE
KRSGRMPYRL LESPRFRAGY DFLVLRCASG ELPQELADWW TDFQSGDGEA REALMAQAKH
APSPSANTGS ASPGKRRRRR RGPAKSDTVV DVNPGSSEET