Gene Rpic12D_2428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2428 
Symbol 
ID8020092 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2548190 
End bp2549035 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content62% 
IMG OID644831209 
Producthypothetical protein 
Protein accessionYP_002982372 
Protein GI241664012 
COG category[S] Function unknown 
COG ID[COG2912] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACTA AAGTCCTCGA TTATTTTTCG GCCCTGGTCG CGGACGACGA CAGCATCCCC 
CTCACAGAAA CCGCCCTGTC GATTGCGCAG GACGCGTATC CGGATCTGGA CCTGCAGGCA
GAGCTGGCCG CCATTGACGT GCTTGTCGCG CGGATCAAAA ACCGCATCGC CGAGGGCACG
CCCGCCATCC AGCGCCTGCG CCTGCTCAAT CAGTTCTTCT ATCGGGAACT GGGCTTCGGC
CCCAATGCAA ACGATTACTA CGACCCCGAG AACTCTTATC TGAATGCGGT GCTGCAGAGC
CGGCGCGGCA TTCCGATCTC CTTGGCCGTG CTGCTGATGG AAATCGGGCA GCAGATCGGC
CTGCCGCTCA AGGGCGTGTC TTTCCCCAAC CACTTCCTGG TGCGCATGAG CATTCCTGCG
GGCGAGGTCG TGCTCGATCC GCTGACGGGG CAGACACTGT CGAAGGAAGA GTTGCAGGAC
ATGCTCGACC CGTACCTGGA AAAGGAAGGC ATCGAAGACC CGAACTCGGT GCCGCTCGGG
GTGTTCCTGC AGGTGGCCAC GCACCGCGAG ATCATCGCGC GCATGCTGCG CAATTTGAAG
GCGATCTACC TGCAGGAATC GCGCTGGCAG CGCCTGCTGG CGGTGCAGCA GCGGCTGGTG
ATTCTGCTTC CCGATTCCAT CGAGGAGGTG CGCGACCGGG GGCTGGCCTA CGCCAATCTG
GAGTGCTTCC GGCCCGCGCT GGAAGATCTC GAAGCGTACG TCGATGCCCG GCCCGATGCA
GCCGATACGG CCAAGCTCAA GGAGCGCATG CCAACGCTGC GCGCCATGAG CAAGAACCTG
AACTGA
 
Protein sequence
MTTKVLDYFS ALVADDDSIP LTETALSIAQ DAYPDLDLQA ELAAIDVLVA RIKNRIAEGT 
PAIQRLRLLN QFFYRELGFG PNANDYYDPE NSYLNAVLQS RRGIPISLAV LLMEIGQQIG
LPLKGVSFPN HFLVRMSIPA GEVVLDPLTG QTLSKEELQD MLDPYLEKEG IEDPNSVPLG
VFLQVATHRE IIARMLRNLK AIYLQESRWQ RLLAVQQRLV ILLPDSIEEV RDRGLAYANL
ECFRPALEDL EAYVDARPDA ADTAKLKERM PTLRAMSKNL N