| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2409 |
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| Symbol | |
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| ID | 8020073 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 2529043 |
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| End bp | 2530566 |
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| Gene Length | 1524 bp |
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| Protein Length | 507 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644831190 |
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| Product | N-acetylmuramoyl-L-alanine amidase |
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| Protein accession | YP_002982353 |
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| Protein GI | 241663993 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.262199 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGATCA AGCATCTGCT GACCGACCAA CCGGATGATC CCCACCTGCC GAGCCAGGCC
CGCCGCCAAT GGCTCACGCG CATGGCCAAG GCTGGCGCAG GCACGGTCAT CCTGAGCCTG
GTGGGCCCGC AGATTGCGCG CGGCGCCAAC ATCGTCGCCG TACGCGTGTG GCCCGCCGAG
GACTACACAC GCGTGACGAT CGAATCCGAC GTCGCGCTCA AGGCCACGCA TCAGCTCATC
AAGGACCCGG ATCGGCTGAT GGTCGACATC GACGGGCTCG AACTGAACCC GACCTTGCGC
GAGCTGGTCG CCAAGATCGC GCCGAACGAT CCGTACATCC GCCAGGTGCG CGTGGGTCAG
AACCGGCCGA GCGTCGTGCG TCTGGTGTTC GACCTGAAGG AAAGCGTCAA CCCACAGGTG
TTCACGCTGC TGCCGATTGC CGGCTATCGG AACCGGCTCG TGTTCGACCT GTACCCGACC
AACCCGCCCG ACCCGCTGAT GCAGCTCGTG CAGGCCACCG AGGGCAAGCA GGAGCGCTTT
GCTGCGTCCG GCGGCACGCC CATGCCGGCG CCGTCGGATG ACGATGATCC GATCGCCGCG
CTGGCACGCC GCGACAGCAG CGCAAGCCCT ACCAAGCCAG CGATCGAAGA GCCGCAACCT
CCGGCACTTG CCAGCCGCAC ACCGCCTCGC AAGGCGCCGC CTCCCACGTC GACGAATCCT
CCATCGACGC TCGCCAACGC GCCGAACACG CCGCCGCAGG AGATCCTTCC CGAGCAACCC
GTGCCGCGTG CGCCGTCGAG CGGCCCGCGC ATGCGCCGCC TGCTTACGGT CGCCATCGAC
CCCGGCCATG GCGGCGAAGA CCCGGGCGCC ACGGGCGGCG CCGGCACGCA CGAGAAAGAC
GTGGTGCTGT CGATCGCTCG CATGCTCAAG GCCAAGATCG ACGCCCAGCC CAACATGCGC
GCCATGATGA CGCGCGATTC CGACTACTTC GTCCCGCTGG GCGTGCGCGT GCAGAAGGCG
CGCCGCGTGC AGGCGGACCT GTTCGTCTCC ATCCACGCCG ATGCATTCGT CACCCCGGAA
GCGCGCGGTG CCTCGGTGTT CGTGCTTTCG GATCGCGGCG CCTCCAGCGC GCAGGCCAAG
TGGCTCGCCA ACAAGGAAAA CGCGGCGGAC ATGATTGGCG GTGCCAATCT CGGCTCGAAA
GACGCCCAGG TCACGCGCGT GCTGTTGGAT TTGTCGACCA CCGCCCAGAT CGGCGACAGC
ATGAAGGTCG GCAAGGCCGT GCTGGACCAG ATCGGCGGCA TCAACCGGCT GCACAAGGGG
CAGGTGGAGC AGGCGGGCTT TGCGGTGCTC AAGGCGCCCG ACATTCCGTC GATCCTCGTC
GAGACGGCCT TCATCTCCAA CCCGGAAGAA GAAGCCAAGC TCAACGACCT GGGGCACCAG
AACCAGCTTG CCGAGGCGAT CCTGCGCGGT ATTCGCGCCT ACTTTGCCAA GAACCCGCCA
TTGTCGCGCA ACCCGGGCGT CTGA
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| Protein sequence | MLIKHLLTDQ PDDPHLPSQA RRQWLTRMAK AGAGTVILSL VGPQIARGAN IVAVRVWPAE
DYTRVTIESD VALKATHQLI KDPDRLMVDI DGLELNPTLR ELVAKIAPND PYIRQVRVGQ
NRPSVVRLVF DLKESVNPQV FTLLPIAGYR NRLVFDLYPT NPPDPLMQLV QATEGKQERF
AASGGTPMPA PSDDDDPIAA LARRDSSASP TKPAIEEPQP PALASRTPPR KAPPPTSTNP
PSTLANAPNT PPQEILPEQP VPRAPSSGPR MRRLLTVAID PGHGGEDPGA TGGAGTHEKD
VVLSIARMLK AKIDAQPNMR AMMTRDSDYF VPLGVRVQKA RRVQADLFVS IHADAFVTPE
ARGASVFVLS DRGASSAQAK WLANKENAAD MIGGANLGSK DAQVTRVLLD LSTTAQIGDS
MKVGKAVLDQ IGGINRLHKG QVEQAGFAVL KAPDIPSILV ETAFISNPEE EAKLNDLGHQ
NQLAEAILRG IRAYFAKNPP LSRNPGV
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