Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_2397 |
Symbol | |
ID | 8020061 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 2518073 |
End bp | 2518774 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644831178 |
Product | Superoxide dismutase |
Protein accession | YP_002982341 |
Protein GI | 241663981 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0605] Superoxide dismutase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.717603 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGCGA TTCCGCACGC GTTTAGCGGG TATTCCGACT ATTTAGCCTG CGGTTTGCGC CGGTTTTGCA AGTCTCCTAC AATCGTCGCT CCCAACCTGT ACAACCCACA GAAGGCAAGA ACAATGGAAC ACACGCTCCC CCCGCTGCCG TACGCCCAAG ACGCTCTGGC GCCGCACATC TCCAAGGAAA CGCTGGAGTT CCACTACGGC AAGCACCATC AGACGTACGT CACGAACCTG AACAACCTGA TCAAGGGCAC CGAGTTCGAG AACCTGAGCC TGGAAGACAT CGTCAAGAAG TCCTCGGGCG GTGTGTTCAA CAACGCCGCA CAGGTCTGGA ACCACACGTT CTACTGGAAC GGCCTGAAGC CGCAAGGCGG TGGCGCTCCG ACCGGCGCGC TGGCTGACGC CATCAACGCC AAGTGGGGCA GCTTCGACAA GTTCAAGGAA GAGTTCACCA AGACGGCCAT CGGCACGTTC GGTTCGGGCT GGGCCTGGCT GGTGAAGAAG GCCGACGGCT CGCTGGATCT GGTGTCGACC TCCAACGCCG CCACGCCGCT GACGACCGAC GCCAAGCCGC TGCTGACCTG CGATGTGTGG GAACACGCTT ACTACATCGA CTACCGCAAC GCCCGTCCGA AGTACGTCGA GGCGTTCTGG AACCTGGTCA ACTGGGACTT CGTTGCCAAG AACTTCGCCT AA
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Protein sequence | MIAIPHAFSG YSDYLACGLR RFCKSPTIVA PNLYNPQKAR TMEHTLPPLP YAQDALAPHI SKETLEFHYG KHHQTYVTNL NNLIKGTEFE NLSLEDIVKK SSGGVFNNAA QVWNHTFYWN GLKPQGGGAP TGALADAINA KWGSFDKFKE EFTKTAIGTF GSGWAWLVKK ADGSLDLVST SNAATPLTTD AKPLLTCDVW EHAYYIDYRN ARPKYVEAFW NLVNWDFVAK NFA
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