Gene Rpic12D_2397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2397 
Symbol 
ID8020061 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2518073 
End bp2518774 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content60% 
IMG OID644831178 
ProductSuperoxide dismutase 
Protein accessionYP_002982341 
Protein GI241663981 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0605] Superoxide dismutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.717603 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGCGA TTCCGCACGC GTTTAGCGGG TATTCCGACT ATTTAGCCTG CGGTTTGCGC 
CGGTTTTGCA AGTCTCCTAC AATCGTCGCT CCCAACCTGT ACAACCCACA GAAGGCAAGA
ACAATGGAAC ACACGCTCCC CCCGCTGCCG TACGCCCAAG ACGCTCTGGC GCCGCACATC
TCCAAGGAAA CGCTGGAGTT CCACTACGGC AAGCACCATC AGACGTACGT CACGAACCTG
AACAACCTGA TCAAGGGCAC CGAGTTCGAG AACCTGAGCC TGGAAGACAT CGTCAAGAAG
TCCTCGGGCG GTGTGTTCAA CAACGCCGCA CAGGTCTGGA ACCACACGTT CTACTGGAAC
GGCCTGAAGC CGCAAGGCGG TGGCGCTCCG ACCGGCGCGC TGGCTGACGC CATCAACGCC
AAGTGGGGCA GCTTCGACAA GTTCAAGGAA GAGTTCACCA AGACGGCCAT CGGCACGTTC
GGTTCGGGCT GGGCCTGGCT GGTGAAGAAG GCCGACGGCT CGCTGGATCT GGTGTCGACC
TCCAACGCCG CCACGCCGCT GACGACCGAC GCCAAGCCGC TGCTGACCTG CGATGTGTGG
GAACACGCTT ACTACATCGA CTACCGCAAC GCCCGTCCGA AGTACGTCGA GGCGTTCTGG
AACCTGGTCA ACTGGGACTT CGTTGCCAAG AACTTCGCCT AA
 
Protein sequence
MIAIPHAFSG YSDYLACGLR RFCKSPTIVA PNLYNPQKAR TMEHTLPPLP YAQDALAPHI 
SKETLEFHYG KHHQTYVTNL NNLIKGTEFE NLSLEDIVKK SSGGVFNNAA QVWNHTFYWN
GLKPQGGGAP TGALADAINA KWGSFDKFKE EFTKTAIGTF GSGWAWLVKK ADGSLDLVST
SNAATPLTTD AKPLLTCDVW EHAYYIDYRN ARPKYVEAFW NLVNWDFVAK NFA