Gene Rpic12D_2394 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2394 
Symbol 
ID8020058 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2515682 
End bp2516224 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content69% 
IMG OID644831176 
Productprotein of unknown function DUF1486 
Protein accessionYP_002982339 
Protein GI241663979 
COG category[R] General function prediction only 
COG ID[COG5485] Predicted ester cyclase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCATTC GCCCCGCCCT GCTTGCCGCC GCCGTGCTGA CGCTGCCCGC TGCCCTCGCC 
ATCGCGCCTG CCGTTGCGGC AACGTCCGAT GCCGATCTGA TCCGCCCGGA CCACGTCGCC
GCAGGGGACA CGCCGCAGGC CGCGGCTGCC GTGCTCGCTG CGCGCCGCTA CGCCACCTTC
TGGCATACCG GCGATGCGCG CTATGCCACG GAAGCGCTGT CGCCTGCGTT TGTCGACCGC
ACACTGCCCG CCGGGCGCGT GCAGGGCACG CAAGGTCCGC TCGACGCATC CAAGGCGTTC
CGCACGGCCG TGCCGGACAT GCGCGTGGAG ATCGAAGACA TGGTCGTCGC CGGCGACCGC
GTCTCGGTGC ACCTGCGCTT TCGCGGACAC TTCACCGGCG AGTTCGGCCG CACGCACGGG
CAGAACCAGC CGATCGACTT CCAGGCTTTC GACCTGTACC GCATCGCCGA CGGCAGGATC
GCTGAAAACT GGCACTTGGA AGACAACCAG ACGCTGCTGC GGCAGATGGG CCTTCAACCG
TAA
 
Protein sequence
MFIRPALLAA AVLTLPAALA IAPAVAATSD ADLIRPDHVA AGDTPQAAAA VLAARRYATF 
WHTGDARYAT EALSPAFVDR TLPAGRVQGT QGPLDASKAF RTAVPDMRVE IEDMVVAGDR
VSVHLRFRGH FTGEFGRTHG QNQPIDFQAF DLYRIADGRI AENWHLEDNQ TLLRQMGLQP