Gene Rpic12D_2391 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2391 
Symbol 
ID8020055 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2513207 
End bp2513971 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content62% 
IMG OID644831173 
Productextracellular solute-binding protein family 3 
Protein accessionYP_002982336 
Protein GI241663976 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGAATC GTCGTCATTT CATGCATTCG ATGCTGGCTT GTGCCGTGGC GTTGTCCGCT 
GCGGCGTCTT TCGCAACCGC TGCGCACGCT GCTGGAGAGC CGCTGCGCGT CGCCACCGAT
GCCACGTTCG CGCCGATGGA GTTTGTCGAA AACGGCAAGC GTACCGGCTT TGATGTGGAC
CTGATCGAGG CACTGGCCCG CACCATGGGC CGCCCGGTCG AATGGACGGA CATCGATTTC
AAGGGCCTCG TGCCGGGCCT GATCTCGCGC CGCTTTGACG TGGCCATCTC GGGCATCTAC
ATCACGGAAG AGCGCAAGAA GGTGGTGGAC TTTACGGTGC CGTACTACCA CGGCGGCCTG
GTCGCGATGG TCAAGCAAGG CAATACGGCC ATCAAGACCC CGGCAGATCT GAACGGCAAG
AAGGTCAGCG TGCAGGTCGG AACCAAGTCG GTCAACTACC TGAAGGAAAA CTATCCGAAG
GTCGAGCGCG TGGAAGTCGA AAAGAACGAG CAGATGTTCA ACCTCGTCGA AATCGGCCGC
GCCGATGCCG CCGTCACAGG CCGCCCCGCC GCCGCGTACT ACGTCAAGGC GCGTCCGGGC
CTGCGCCTGG TTGAGCCCGC GCTGACTAGC GAGGAATACG GCATCGCCGT GCGTCGCGAT
CAGCCCGAGC TGACCAAGGC GTTGAACGCG GCATTGGACA AGATCAAGGC CGACGGCACG
TACGACCAGA TCGTCAAGAA GTGGTTTGGC ACCACCGCGA AGTAA
 
Protein sequence
MGNRRHFMHS MLACAVALSA AASFATAAHA AGEPLRVATD ATFAPMEFVE NGKRTGFDVD 
LIEALARTMG RPVEWTDIDF KGLVPGLISR RFDVAISGIY ITEERKKVVD FTVPYYHGGL
VAMVKQGNTA IKTPADLNGK KVSVQVGTKS VNYLKENYPK VERVEVEKNE QMFNLVEIGR
ADAAVTGRPA AAYYVKARPG LRLVEPALTS EEYGIAVRRD QPELTKALNA ALDKIKADGT
YDQIVKKWFG TTAK