Gene Rpic12D_2378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2378 
Symbol 
ID8020042 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2501024 
End bp2502232 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content66% 
IMG OID644831160 
Productmetal dependent phosphohydrolase 
Protein accessionYP_002982323 
Protein GI241663963 
COG category[T] Signal transduction mechanisms 
COG ID[COG2206] HD-GYP domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAAGC GCATCGCTAT CGAACACCTG CGGGTGGGCA TGTACCTCGA CGAATTCGTC 
GGCTCCTGGC TGGAACACCC GTTCTGGCGG GCCCGTTTTC GCGTGGAAGA TGCCGCCCAA
TTGCAACGCC TGCGTGCCAG CGGCGTGCGC GAGGTGTGGA TCGACACCAC GCGCGGCACC
GACGTGGCCG CCGCCAACGC GGCACCTCCG GCCCCCGAAA TGCCGGTGCC ACCGGCCTGC
TCCGCCGACG CCCACATTGC GCCCCGCCCC ATCACGCATG CGGAAGAAAT GCGCCGTGCC
GCTCGCCTCA TCAGTAAGGC GGAGGTCGCC GTCCAGGCTA TGTTTGCCGA TGCTCGCATG
GGCCGCACGA TCGAAGCGCG CGATGCACTG CCATTGGTGG AAGCCATTTC AGGCTCCGTC
GACCGCCACC CGAGCGCGCT GACCAGCCTG GTGCGCCTGA AAGCGAAAGA TCGCTACACG
TTCCTGCATT CGGTAGCCGT GTGCGCGCTC ATGGTGTCGC TTGGCCGTCA GCTAGGGCTG
TCGGATGACG AAGTCCGCGA TGCGGGCCTC GCCGGCCTGT TGCATGACAT CGGCAAGATC
GCGATTCCGC CCGAGGTGTT GAACAAGCCC GGTGCACTGA CCGACGCTGA ATTCCGCCAC
GTGATCGTCC ACCCGCAGGC GGGCCACGAC ATCCTGACGG GCGACAGCAG CATGCGCGAC
ATCGCGCTCG ACGTCTGCCT GCACCACCAC GAGCGCATGG ACGGCACCGG CTATCCGCAC
AAGCTGGCTG GCGAAGGCAT CTCGCTGTTC GCGCGCATGG GCGCCATCTG CGACGTGTAT
GACGCGGTCA CGTCCGACCG CCCGTACAAG AAAGCGTGGG AAGCCGCCTA CGCGGTGCAG
CGCATGGTCG AATGGCGCGG CAACCATTTC GACCCGATGG TGTTCAACGC CTTCGTCAAG
AGCGTGGGCA TCTATCCGGT GGGTTCGCTC GTCCGGCTAC GCTCGGGCCG GCTGGCGGTG
GTCATGCAGC ATGCACCGGG CGCCTTGCTG ACGCCCACGG TCAAGGTATT CTTCTCGATA
TCGTCGGGCA CGCGGGTTGC GCCCGAACTC ATCGATCTGG CGCAGACTGG CGACCAGATC
GTTTCCCGAG AAGAACCCCG CGACTGGGGC CTGACCGACC TCAACGAACT TTGGATACAC
GGCGACTGA
 
Protein sequence
MRKRIAIEHL RVGMYLDEFV GSWLEHPFWR ARFRVEDAAQ LQRLRASGVR EVWIDTTRGT 
DVAAANAAPP APEMPVPPAC SADAHIAPRP ITHAEEMRRA ARLISKAEVA VQAMFADARM
GRTIEARDAL PLVEAISGSV DRHPSALTSL VRLKAKDRYT FLHSVAVCAL MVSLGRQLGL
SDDEVRDAGL AGLLHDIGKI AIPPEVLNKP GALTDAEFRH VIVHPQAGHD ILTGDSSMRD
IALDVCLHHH ERMDGTGYPH KLAGEGISLF ARMGAICDVY DAVTSDRPYK KAWEAAYAVQ
RMVEWRGNHF DPMVFNAFVK SVGIYPVGSL VRLRSGRLAV VMQHAPGALL TPTVKVFFSI
SSGTRVAPEL IDLAQTGDQI VSREEPRDWG LTDLNELWIH GD