Gene Rpic12D_2342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2342 
Symboldut 
ID8020006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2465983 
End bp2466429 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content66% 
IMG OID644831125 
Productdeoxyuridine 5'-triphosphate nucleotidohydrolase 
Protein accessionYP_002982288 
Protein GI241663928 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0756] dUTPase 
TIGRFAM ID[TIGR00576] deoxyuridine 5'-triphosphate nucleotidohydrolase (dut) 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.145378 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.124389 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTCG ACGTCAAGAT CCTCGACGCC CGCCTGCACG ACCAGCTTCC GCAGTACGCC 
ACCACCGGCA GCGCCGGGCT GGACCTGCGC GCCTGCATCG ACGCCCCGCT CACCATCGAG
CCCGGCACCA CGCATCTGGT CCCGACCGGC ATGGCCATCC ACCTGGCCGA TCCGGGCTAT
GCCGCGCTGA TCCTGCCGCG CTCGGGCATG GGCCACAAGC ACGGCATCGT GCTCGGCAAC
CTGGTCGGGC TGATCGATTC GGACTATCAA GGCCAACTTA TGGTCAGCAC GTGGAACCGT
GGCAGCACGG CATTCGTGCT CAATCCGATG GAGCGCCTTG CACAACTGGT GATCGTGCCG
GTCGTGCAAG CCGAGCTGAA CATCGTCGAC GACTTTGCCG AGAGCGAGCG CGGTGCCGGT
GGTTTCGGCA GCACCGGGCG CCACTGA
 
Protein sequence
MKLDVKILDA RLHDQLPQYA TTGSAGLDLR ACIDAPLTIE PGTTHLVPTG MAIHLADPGY 
AALILPRSGM GHKHGIVLGN LVGLIDSDYQ GQLMVSTWNR GSTAFVLNPM ERLAQLVIVP
VVQAELNIVD DFAESERGAG GFGSTGRH